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Napari for large volumetric data; feedback and issues #471
I have been exploring the use of napari for displaying large volumetric data and wanted to provide some issues / feedback.
Using napari for large volumetric data:
I haven't spend much time peaking under the hood of napari, so please excuse if something I have listed here is implemented already and be so kind to point me to it.
Also, I have been working on convenience functions for napari and @jni suggested merging this into napari directly, see constantinpape/heimdall#5.
Edit: I had a closer look at the issues here and referenced related issues.
@constantinpape this list is amazing - that's so great you're already finding value from napari and building on top of it. I'd also love to see anything you're doing of general interest make back upstream into napari, but agree we can approach that gradually. It seems that you're further along on the advanced fileIO than we are - we've just started discussing it here #379.
My overall take though is that each of your major bullets is something that we really want to see napari be able to do. We want to make sure napari scales to enormous datasets, such as the EM ones you're using.
Looking though the list my hunch is that the
Thanks for referencing this. I will have a look later and maybe add some comments.
Very happy to hear this :).
That's pretty accurate. I would prioritize my needs as follows:
All the rest would be nice to have, but for now is not essential for me.
Sounds good! I will have a look at the feature issues later.