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LICENSE
Readme.md
makefile
paf2jpaf.py
saved_space.py

Readme.md

jPAF

This repro containt all element to repoduce my experience about long read pairwise alignment format describe in this blog post

Requirement

  • dextractor
  • python3
  • make
  • minimap2

Repoduce

Download data:

make download_data

Run mapping and file generation:

make run