elmr package v0.5.5

elmr 0.5.5

• teach open_fafb to make many URLs at once e.g. for results of tagged_details
  (#41)

elmr 0.5.4

• add plot3d.ngraph (shows directed graph in 3d)
• fix simplify_neuron when spine has 1 branch only (#40)
• vignette tweaks

elmr 0.5.3

• teach simplify_neuron to handle the inverse as well (#38)
• change IVLP -> WED in FAFBNP surfaces as well as FAFB14NP (#35)
• teach fetchn_fafb to work even if FAFB is given as the reference brain (#39)

elmr package v0.5.2

• teach simplify_neuron to handle arbitrary number of branch points (#37)
• minor doc fixes
• build doc site with pkgdown 1.0

elmr package v0.5.1

• teach distal_to to handle multiple input nodes
• add simplify_neuron function to make neuron with just one branchpoint
• fix summarise_contributions for 'synapses' (#34)
• change IVLP -> WED in FAFBNP surfaces (#35)
• fix stitch_neurons for latest nat 1.9 prerelease (#36)

elmr package v0.5

• switch to FAFB14 as the default EM assembly
• provide default objects (FAFB, FAFB.surf, FAFBNP.surf) that will always point
  to current assembly.
• fix bug in distal_to (#31)
• doc improvements for distal_to

elmr package v0.4.2

elmr 0.4.2

• update to 170303_ELM_landmarks_v14 landmarks (including transforming surfaces)
• first version of unspike function
• new vignette - making meshes programmatically
• insist on nat >= 1.8.8
• fetchn_fafb/nblast_fafb can take pre-downloaded neuronlist
• teach unspike to keep connectors/soma (#29)

elmr package v0.4.1

• Add functions to summarise tracer effort

elmr package v0.4

• switch FAFB13-JFRC2013 transform to 170211_new_ELM_landmarks_v7.csv
  (71 landmarks more evenly spaced on both sides of the brain)
• update FAFB13 and FAFB13NP surface objects accordingly
• fix open_fafb after change in stack id handling
• add landmarks vignette

elmr package v0.3

elmr 0.3

• make nblast_fafb parallelised by default
• give open_fafb arguments for selecting neuron/nodes (#24)
• add FAFB13 brain and neuropil surface objects
• complete switch to FAFB13 assembly (vignettes etc)
• fix open_fafb for v13 (#23)

elmr 0.2.1

• teach nblast_fafb to cope with db length <100 (#22)

elmr 0.2

• switch to FAFB13 as default template brain
• much new functionality including transforming between template brains via
  xform_brain
• nblast_fafb for searches

elmr 0.1

• first version