diff --git a/.codespellignore b/.codespellignore new file mode 100644 index 0000000..aeb8850 --- /dev/null +++ b/.codespellignore @@ -0,0 +1,4 @@ +in +out +inout +matchs diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 97a392e..22ff4ad 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -4,26 +4,23 @@ on: [push, pull_request, release] jobs: build: - runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.8", "3.9", "3.10", "3.11"] + python-version: ["3.10", "3.11", "3.12"] steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@v4 + uses: actions/setup-python@v5 with: python-version: ${{ matrix.python-version }} - name: Install dependencies - run: | - python -m pip install --upgrade pip - pip install tox "poetry>=1.4" coveralls - - name: TOX - run: tox + run: pip install --no-cache-dir nox + - name: NOX + run: nox - name: Upload coverage data to coveralls.io - run: coveralls --service=github + run: nox -s dev -- coveralls --service=github env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} COVERALLS_FLAG_NAME: ${{ matrix.test-name }} @@ -33,22 +30,28 @@ jobs: name: Indicate completion to coveralls.io needs: build runs-on: ubuntu-latest - container: python:3-slim steps: - - name: Finished - run: | - pip3 install --upgrade coveralls - coveralls --service=github --finish - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + - uses: actions/checkout@v4 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v5 + with: + python-version: ${{ matrix.python-version }} + - name: Install dependencies + run: pip install --no-cache-dir nox + - name: Upload coverage data to coveralls.io + run: nox -s dev -- coveralls --service=github --finish + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} publish: if: github.event_name == 'push' && github.ref_type == 'tag' needs: coveralls + name: upload release to PyPI runs-on: ubuntu-latest + permissions: + id-token: write steps: - - uses: actions/checkout@v3 - - name: Build and publish to pypi - uses: JRubics/poetry-publish@v1.17 - with: - pypi_token: ${{ secrets.PYPI_TOKEN }} \ No newline at end of file + - uses: actions/checkout@v4 + - uses: pdm-project/setup-pdm@v4 + - name: Publish package distributions to PyPI + run: pdm publish diff --git a/.gitignore b/.gitignore index 5b77539..c771eaf 100644 --- a/.gitignore +++ b/.gitignore @@ -1,15 +1,12 @@ -*.egg-info/ -*.xml -.coverage -.tox +*.pyc +/.*_cache/ +/.coverage +/.nox/ +/.venv* +/.pdm-python +/dist/ +/docs.zip +/report.xml +/site/ +/.hypothesis .test2ref -.venv -.mypy_cache -/.vscode -/docs/api -__pycache__ -build -dist/ -_readthedocs/ -poetry.lock -setup.py diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml new file mode 100644 index 0000000..c4956e2 --- /dev/null +++ b/.pre-commit-config.yaml @@ -0,0 +1,42 @@ +repos: +- repo: https://github.com/astral-sh/ruff-pre-commit + # Ruff version. + rev: v0.3.7 + hooks: + # Run the linter. + - id: ruff + args: [ --fix ] + # Run the formatter. + - id: ruff-format + +- repo: https://github.com/pre-commit/pre-commit-hooks + rev: v3.2.0 + hooks: + - id: trailing-whitespace + - id: end-of-file-fixer + - id: check-yaml + - id: check-toml + - id: check-xml + - id: debug-statements + - id: check-added-large-files + - id: check-merge-conflict + - id: mixed-line-ending + args: + - "--fix=lf" + +- repo: https://github.com/Lucas-C/pre-commit-hooks + rev: v1.5.5 + hooks: + - id: remove-tabs + args: [--whitespaces-count, '2'] # defaults to: 4 + +- repo: https://github.com/codespell-project/codespell + rev: v2.2.4 + hooks: + - id: codespell + args: + - "--write-changes" + - "--ignore-words=.codespellignore" + additional_dependencies: + - tomli + exclude: '^pdm\.lock$' diff --git a/.readthedocs.yaml b/.readthedocs.yaml index 0e2ca06..362c5dc 100644 --- a/.readthedocs.yaml +++ b/.readthedocs.yaml @@ -8,11 +8,11 @@ version: 2 build: os: ubuntu-22.04 tools: - python: "3.9" + python: "3.11" commands: - pip install --upgrade --no-cache-dir pip - - pip install --no-cache-dir "poetry>=1.4" - - poetry install --with=doc --without=test - - poetry run make html -C docs - - cp -r docs/build _readthedocs + - pip install --no-cache-dir nox + - nox -s doc + - mkdir _readthedocs + - cp -r site _readthedocs/html diff --git a/CONTRIBUTE.md b/CONTRIBUTE.md deleted file mode 100644 index a2b14e4..0000000 --- a/CONTRIBUTE.md +++ /dev/null @@ -1,53 +0,0 @@ -# Contribute - -This project uses https://github.com/nbiotcloud/python-template 1.1.0 - -## Testing - -### Create Environment - -Run these commands just the first time: - -```bash -# Ensure python3 is installed -python3 -m venv .venv -source .venv/bin/activate -pip install tox "poetry>=1.4" -``` - -### Enter Environment - -Run this command once you open a new shell: - -```bash -source .venv/bin/activate -``` - -### Test Your Changes - -```bash -# test -tox -``` - -### Release - -```bash -# Ensure main -git checkout main -git pull - -# Version Bump -poetry version minor -# OR -poetry version patch - -# Commit, Tag and Push -version=$(poetry version -s) -git commit -m"version bump to ${version}" pyproject.toml -git tag "${version}" -m "Release ${version}" -git push -git push --tags - -# Publishing is handled by CI -``` diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md new file mode 100644 index 0000000..c18c875 --- /dev/null +++ b/CONTRIBUTING.md @@ -0,0 +1,54 @@ +* DOCME: refer github contribution guide +* DOCME: our requirements + +## Testing + +### Create Environment + +Run these commands just the first time: + +```bash +# Ensure python3 is installed +python3 -m venv .venv +source .venv/bin/activate +pip install nox +``` + +### Enter Environment + +Run this command once you open a new shell: + +```bash +source .venv/bin/activate +``` + +### Test Your Changes + +```bash +# test +nox -R +``` + +## Project Structure + +The project contains these files and directories: + +| File/Directory | Description | +|---|---| +| `src/` | Python Package Sources - the files this is all about. | +| `pyproject.toml` | Python Package Meta File. Also contains all tool settings. | +| `.gitignore` | Lists of files and directories ignored by version control system. | +| `.github/` | Github Settings. | +| `.readthedocs.yaml` | Documentation Server Configuration. | +| `.pre-commit-config.yaml` | Pre-Commit Check Configuration. | + +Next to that, there are some temporary files ignored by version control system. + +| File/Directory | Description | +|---|---| +| `pdm.lock` | File with resolved python package dependencies | +| `htmlcov/` | Test Execution Code Coverage Report in HTML format. | +| `report.xml` | Test Execution Report. | +| `.*_cache/` | Cache Directory. | +| `.nox/` | [NOX][nox] directory. | +| `.venv*` | Virtual Environments | diff --git a/README.md b/README.md index 414a24d..cb820b6 100644 --- a/README.md +++ b/README.md @@ -1,14 +1,12 @@ [![PyPI Version](https://badge.fury.io/py/test2ref.svg)](https://badge.fury.io/py/test2ref) [![Python Build](https://github.com/nbiotcloud/test2ref/actions/workflows/main.yml/badge.svg)](https://github.com/nbiotcloud/test2ref/actions/workflows/main.yml) -[![Documentation](https://readthedocs.org/projects/test2ref/badge/?version=latest)](https://test2ref.readthedocs.io/en/stable) +[![Documentation](https://readthedocs.org/projects/test2ref/badge/?version=stable)](https://test2ref.readthedocs.io/en/stable/?badge=stable) [![Coverage Status](https://coveralls.io/repos/github/nbiotcloud/test2ref/badge.svg?branch=main)](https://coveralls.io/github/nbiotcloud/test2ref?branch=main) [![python-versions](https://img.shields.io/pypi/pyversions/test2ref.svg)](https://pypi.python.org/pypi/test2ref) -[![pylint](https://img.shields.io/badge/linter-pylint-%231674b1?style=flat)](https://www.pylint.org/) -[![black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/psf/black) # Testing Against Learned Reference Data -* [Documentation](https://test2ref.readthedocs.io/en/latest/) +* [Documentation](https://test2ref.readthedocs.io/en/stable/) * [PyPI](https://pypi.org/project/test2ref/) * [Sources](https://github.com/nbiotcloud/test2ref) * [Issues](https://github.com/nbiotcloud/test2ref/issues) diff --git a/docs/conf.py b/docs/conf.py deleted file mode 100644 index 4169ce5..0000000 --- a/docs/conf.py +++ /dev/null @@ -1,61 +0,0 @@ -# -# MIT License -# -# Copyright (c) 2024 nbiotcloud -# -# Permission is hereby granted, free of charge, to any person obtaining a copy -# of this software and associated documentation files (the "Software"), to deal -# in the Software without restriction, including without limitation the rights -# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell -# copies of the Software, and to permit persons to whom the Software is -# furnished to do so, subject to the following conditions: -# -# The above copyright notice and this permission notice shall be included in all -# copies or substantial portions of the Software. -# -# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR -# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, -# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE -# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER -# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, -# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE -# SOFTWARE. -# - -# Configuration file for the Sphinx documentation builder. -# -# For the full list of built-in configuration values, see the documentation: -# https://www.sphinx-doc.org/en/master/usage/configuration.html - -# -- Project information ----------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information - -project = "test2ref" -copyright = "2024, nbiotcloud" -author = "nbiotcloud" - -# -- General configuration --------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration - -extensions = [ - "sphinx.ext.autodoc", - "sphinx.ext.doctest", - "sphinx.ext.intersphinx", - "sphinx.ext.napoleon", - "sphinx.ext.todo", - "sphinx.ext.viewcode", - # Allows use of emojis - see https://sphinxemojicodes.readthedocs.io/en/stable/ for a list of available icons - "sphinxemoji.sphinxemoji", -] - -templates_path = ["_templates"] -exclude_patterns = ["_build", "Thumbs.db", ".DS_Store"] - - -# -- Options for HTML output ------------------------------------------------- -# https://www.sphinx-doc.org/en/master/usage/configuration.html#options-for-html-output - -html_theme = "sphinx_rtd_theme" -# html_static_path = ["static"] - -intersphinx_mapping = {} diff --git a/docs/contributing.md b/docs/contributing.md new file mode 100644 index 0000000..f9a79cb --- /dev/null +++ b/docs/contributing.md @@ -0,0 +1,3 @@ +{% + include-markdown "../CONTRIBUTING.md" +%} diff --git a/docs/index.md b/docs/index.md new file mode 100644 index 0000000..706a03b --- /dev/null +++ b/docs/index.md @@ -0,0 +1,15 @@ +[![PyPI Version](https://badge.fury.io/py/test2ref.svg)](https://badge.fury.io/py/test2ref) +[![Python Build](https://github.com/nbiotcloud/test2ref/actions/workflows/main.yml/badge.svg)](https://github.com/nbiotcloud/test2ref/actions/workflows/main.yml) +[![Documentation](https://readthedocs.org/projects/test2ref/badge/?version=stable)](https://test2ref.readthedocs.io/en/stable/) +[![Coverage Status](https://coveralls.io/repos/github/nbiotcloud/test2ref/badge.svg?branch=main)](https://coveralls.io/github/nbiotcloud/test2ref?branch=main) +[![versions](https://img.shields.io/pypi/pyversions/test2ref.svg)](https://github.com/nbiotcloud/test2ref) + +# Testing Against Learned Reference Data + +* [Documentation](https://test2ref.readthedocs.io/en/stable/) +* [PyPI](https://pypi.org/project/test2ref/) +* [Sources](https://github.com/nbiotcloud/test2ref) +* [Issues](https://github.com/nbiotcloud/test2ref/issues) + + +::: test2ref diff --git a/docs/index.rst b/docs/index.rst deleted file mode 100644 index d04f298..0000000 --- a/docs/index.rst +++ /dev/null @@ -1,15 +0,0 @@ -Testing Against Learned Reference Data -====================================== - -Links ------ - -- `PyPI - Python Package Index `_ -- `Source Code `_ -- `Issues `_ - - -.. automodule:: test2ref - :members: - :undoc-members: - :show-inheritance: diff --git a/docs/make.bat b/docs/make.bat deleted file mode 100644 index 954237b..0000000 --- a/docs/make.bat +++ /dev/null @@ -1,35 +0,0 @@ -@ECHO OFF - -pushd %~dp0 - -REM Command file for Sphinx documentation - -if "%SPHINXBUILD%" == "" ( - set SPHINXBUILD=sphinx-build -) -set SOURCEDIR=. -set BUILDDIR=_build - -%SPHINXBUILD% >NUL 2>NUL -if errorlevel 9009 ( - echo. - echo.The 'sphinx-build' command was not found. Make sure you have Sphinx - echo.installed, then set the SPHINXBUILD environment variable to point - echo.to the full path of the 'sphinx-build' executable. Alternatively you - echo.may add the Sphinx directory to PATH. - echo. - echo.If you don't have Sphinx installed, grab it from - echo.https://www.sphinx-doc.org/ - exit /b 1 -) - -if "%1" == "" goto help - -%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O% -goto end - -:help -%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O% - -:end -popd diff --git a/mkdocs.yml b/mkdocs.yml new file mode 100644 index 0000000..f9550ed --- /dev/null +++ b/mkdocs.yml @@ -0,0 +1,76 @@ +site_name: TEST2REF +site_description: Testing Against Learned Reference Data +site_url: https://test2ref.readthedocs.io/en +repo_url: https://github.com/nbiotcloud/test2ref +#strict: true +copyright: Copyright (c) 2024 nbiotcloud + +theme: + name: material + palette: + - media: "(prefes-color-scheme: light)" + scheme: default + toggle: + icon: material/brightness-7 + name: Switch to dark mode + - media: "(prefes-color-scheme: dark)" + scheme: slate + toggle: + icon: material/brightness-4 + name: Switch to light mode + features: + - navigation.footer + - navigation.tabs + - navigation.tabs.sticky + - content.code.copy + - content.code.select + - content.code.annotate + +nav: + - Get Started: + - Welcome to TEST2REF: index.md + - Contributing: contributing.md + +plugins: + - search + - include-markdown + - literate-nav: + nav_file: README.md + implicit_index: true + - mkdocstrings: + default_handler: python + handlers: + python: + options: + docstring_options: + ignore_init_summary: true + summary: true + show_source: false + unwrap_annotated: true + members_order: source + show_docstring_parameters: true + show_docstring_other_parameters: true + separate_signature: true + signature_crossrefs: true + show_signature_annotations: false + show_symbol_type_heading: true + # preload_modules: [pydantic] + inherited_members: false + import: + - https://docs.python.org/3/objects.inv + +markdown_extensions: + - attr_list + - mkdocs-click + - pymdownx.details + - pymdownx.highlight: + anchor_linenums: true + line_spans: __span + pygments_lang_class: true + - pymdownx.inlinehilite + - pymdownx.snippets + - pymdownx.superfences + +watch: + - src + - CONTRIBUTING.md diff --git a/noxfile.py b/noxfile.py new file mode 100644 index 0000000..6b5f460 --- /dev/null +++ b/noxfile.py @@ -0,0 +1,115 @@ +# +# MIT License +# +# Copyright (c) 2024 nbiotcloud +# +# Permission is hereby granted, free of charge, to any person obtaining a copy +# of this software and associated documentation files (the "Software"), to deal +# in the Software without restriction, including without limitation the rights +# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +# copies of the Software, and to permit persons to whom the Software is +# furnished to do so, subject to the following conditions: +# +# The above copyright notice and this permission notice shall be included in all +# copies or substantial portions of the Software. +# +# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE +# SOFTWARE. +# + +""" +NOX Configuration. + +See [NOX Documentation](https://nox.thea.codes/en/stable/) for further details +""" + +import os +import pathlib +import shutil + +import nox + +os.environ.update( + { + "PDM_IGNORE_SAVED_PYTHON": "1", + "LANGUAGE": "en_US", + } +) +nox.options.sessions = ["format", "test", "checkdeps", "checktypes", "doc"] +nox.options.reuse_existing_virtualenvs = True + + +@nox.session() +def format(session: nox.Session) -> None: + """Run Code Formatter and Checks.""" + _init(session) + session.run_install("pdm", "install", "-G", "format") + session.run("pre-commit", "run", "--all-files") + + +@nox.session() +def test(session: nox.Session) -> None: + """Run Test - Additional Arguments are forwarded to `pytest`.""" + _init(session) + session.run_install("pdm", "install", "-G", "test") + session.run("pytest", "-vv", *session.posargs) + htmlcovfile = pathlib.Path().resolve() / "htmlcov" / "index.html" + print(f"Coverage report:\n\n file://{htmlcovfile!s}\n") + + +@nox.session() +def checkdeps(session: nox.Session) -> None: + """Check Dependencies.""" + _init(session) + session.run_install("pdm", "install") + session.run("python", "-c", "import test2ref") + + +@nox.session() +def checktypes(session: nox.Session) -> None: + """Run Type Checks.""" + _init(session) + session.run_install("pdm", "install", "-G", "checktypes") + session.run("mypy", "src", "tests") + + +@nox.session() +def doc(session: nox.Session) -> None: + """Build Documentation.""" + _init(session) + session.run_install("pdm", "install", "-G", "doc") + session.run("mkdocs", "build") + shutil.make_archive("docs", "zip", "site") + docindexfile = pathlib.Path().resolve() / "site" / "index.html" + print(f"Documentation is available at:\n\n file://{docindexfile!s}\n") + + +@nox.session(name="doc-serve") +def doc_serve(session: nox.Session) -> None: + """Build Documentation and serve via HTTP.""" + _init(session) + session.run_install("pdm", "install", "-G", "doc") + session.run("mkdocs", "serve", "--no-strict") + + +@nox.session() +def dev(session: nox.Session) -> None: + """Development Environment - Additional Arguments Are Executed.""" + _init(session) + session.run_install("pdm", "install", "-G", ":all") + session.run("pip", "install", "-e", ".") + if session.posargs: + session.run(*session.posargs, external=True) + + +def _init(session: nox.Session): + session.install("pdm") + lockfile = pathlib.Path("pdm.lock") + + if not lockfile.exists(): + session.run("pdm", "lock") diff --git a/pdm.lock b/pdm.lock new file mode 100644 index 0000000..e0bfec5 --- /dev/null +++ b/pdm.lock @@ -0,0 +1,1055 @@ +# This file is @generated by PDM. +# It is not intended for manual editing. + +[metadata] +groups = ["default", "checktypes", "doc", "format", "test"] +strategy = ["inherit_metadata"] +lock_version = "4.5.0" +content_hash = "sha256:a7295df3e904c71724642d3358e387b667857ecc37e20243cc4b8fdfd1523788" + +[[metadata.targets]] +requires_python = ">=3.10.0,<4.0" + +[[package]] +name = "babel" +version = "2.16.0" +requires_python = ">=3.8" +summary = "Internationalization utilities" +groups = ["doc"] +dependencies = [ + "pytz>=2015.7; 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merge, publish, distribute, sublicense, and/or sell +# copies of the Software, and to permit persons to whom the Software is +# furnished to do so, subject to the following conditions: +# +# The above copyright notice and this permission notice shall be included in all +# copies or substantial portions of the Software. +# +# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE +# SOFTWARE. +# + +[project] name = "test2ref" -version = "0.4.2" +version = "0.5.0" description = "Testing Against Learned Reference Data" readme = "README.md" -license = "MIT" authors = [ ] classifiers = [ "Programming Language :: Python :: 3", "Operating System :: OS Independent", ] - -packages = [ - { include = "test2ref" }, +requires-python = ">=3.10.0,<4.0" +dependencies = [ + "binaryornot>=0.4.4", ] [project.urls] "Homepage" = "https://github.com/nbiotcloud/test2ref" -"Documentation" = "https://test2ref.readthedocs.io/en/latest/" +"Documentation" = "https://test2ref.readthedocs.io/en/stable/" "Bug Tracker" = "https://github.com/nbiotcloud/test2ref/issues" -#[tool.poetry.scripts] - - -[tool.poetry.dependencies] -python = '^3.8.2' -binaryornot = "^0.4.4" - -[tool.poetry.group.test.dependencies] -black = '^23.3.0' -coverage = '^6.4.4' -isort = '^5.9' -mypy = "^1.3.0" -nbcpychecker = '^1.0.0' -pylint = '^2.15' -pytest = '^7.3' - -[tool.poetry.group.doc.dependencies] -sphinx = '^5.1.1' -sphinx-rtd-theme = "^1.0.0" -sphinxemoji = ">=0.2.0" - [build-system] -requires = ["setuptools", "poetry_core>=1.0"] -build-backend = "poetry.core.masonry.api" +requires = ["pdm-backend"] +build-backend = "pdm.backend" +[tool.pdm] +[tool.pdm.dev-dependencies] +format = [ + "pre-commit>=3.5.0", +] +test = [ + "contextlib-chdir>=1.0.2", + "coveralls>=3.3.1", + "pytest-cov>=5.0.0", + "test2ref>=0.4.2", +] +checktypes = [ + "mypy>=1.9.0", +] +doc = [ + "mkdocs-include-markdown-plugin>=6.0.5", + "mkdocs-literate-nav>=0.6.1", + "mkdocs-material>=9.5.18", + "mkdocstrings-python>=1.9.2", + "mkdocs-click>=0.8.1", +] + +[tool.pdm.build] +includes = ["src/test2ref"] -[tool.black] +[tool.ruff] line-length = 120 -include = '\.pyi?$' -exclude = ''' -/( - \.eggs - | \.git - | \.mypy_cache - | \.venv - | \.tox - | build - | dist - | setup\.py -)/ -''' +fix = true +target-version = "py310" +[tool.ruff.lint] +select = [ + # isort + "I", + # pyflakes + "F", + # pycodestyle + "E", "W", + # pydocstyle + "D", + # flake8-2020 + "YTT", + # flake8-bugbear + "B", + # flake8-quotes + "Q", + # flake8-debugger + "T10", + # flake8-gettext + "INT", + # pylint + "PL", + # misc lints + "PIE", + # flake8-pyi + "PYI", + # tidy imports + "TID", + # implicit string concatenation + "ISC", + # type-checking imports + "TCH", + # comprehensions + "C", + "C4", + # pygrep-hooks + "PGH", + # Ruff-specific rules + "RUF", + # flake8-bandit: exec-builtin + "S102", + # numpy-legacy-random + "NPY002", + # Perflint + "PERF", + # flynt + "FLY", + # flake8-logging-format + "G", + # pyupgrade + "UP", + # annotation + # "ANN" + # bandit + "S", + # Argument + # "ARG", + # Pathlib + "PTH", + # Simplify + # "SIM", + # Return + "RET", + # Raise + "RSE", +] +ignore = [ + # too-many-arguments + 'PLR0913', + # Ambiguous doc + 'D203', 'D212', 'D402', 'D406', + # Multiline doc is ok. + 'D200', + # We use the class for constructor doc + 'D107', + # Magic Method Documentation is optional + 'D105', + # We use faster isinstance checks + 'UP038', + # Assert + 'S101', +] +[tool.ruff.lint.per-file-ignores] +"test_*" = [ + # Magic Values + "PLR2004", + # Argument + "ARG001", +] -[tool.isort] -profile = "black" -line_length = 120 +[tool.ruff.lint.pydocstyle] +convention = "google" + +[tool.pytest.ini_options] +addopts =""" + --cov test2ref + --cov-report term + --cov-report html + --doctest-glob=docs/* + --doctest-modules + --ignore=noxfile.py + --ignore-glob=tests/testdata* + --log-level=DEBUG + --junitxml=report.xml +""" +filterwarnings = [ + "error", +] [tool.coverage.report] exclude_lines = [ 'return NotImplemented', 'raise NotImplementedError()', - 'pragma: no cover' -] - - -[tool.pylint.'MESSAGES CONTROL'] -max-line-length = 120 -extension-pkg-whitelist = "pydantic" -disable = [ + 'pragma: no cover', + 'assert False', ] [tool.mypy] +disable_error_code = "misc" ignore_missing_imports = true +# plugins = "pydantic.mypy" -[tool.tox] -legacy_tox_ini = """ -[tox] -envlist = py,py-min -isolated_build = True - -[tox:.package] -basepython = python3 - -[testenv:py] -allowlist_externals = * -setenv = - LANGUAGE=en_US - -commands = - poetry install --with=test --with=doc - poetry run black . - poetry run isort . - poetry run coverage run --source=test2ref --branch -m pytest --doctest-glob=docs/*.rst --doctest-modules --ignore-glob=tests/testdata* --ignore=docs/conf.py --log-level=DEBUG -vv --junitxml=report.xml - poetry run coverage report - poetry run coverage html - poetry run coverage xml - poetry run pylint test2ref tests - poetry run mypy test2ref - poetry run make html -C docs - poetry run nbcpychecker check -""" +[[tool.mypy.overrides]] +module = "tests.*" +allow_untyped_defs = true diff --git a/test2ref/__init__.py b/src/test2ref/__init__.py similarity index 85% rename from test2ref/__init__.py rename to src/test2ref/__init__.py index b111002..1aabc60 100644 --- a/test2ref/__init__.py +++ b/src/test2ref/__init__.py @@ -44,34 +44,35 @@ Next to that, stdout, stderr and logging can be included in the reference automatically. -Example +Example: ------- - ->>> def test_something(tmp_path, capsys): -... (tmp_path / "file.txt").write_text("Hello Mars") -... print("Hello World") -... assert_refdata(test_something, tmp_path, capsys=capsys) + >>> def test_something(tmp_path, capsys): + ... (tmp_path / "file.txt").write_text("Hello Mars") + ... print("Hello World") + ... assert_refdata(test_something, tmp_path, capsys=capsys) API --- """ + import os import re import subprocess +from collections.abc import Callable, Iterable from pathlib import Path from shutil import copytree, ignore_patterns, rmtree from tempfile import TemporaryDirectory -from typing import List, Optional, Tuple, Union +from typing import Any from binaryornot.check import is_binary PRJ_PATH = Path.cwd() -PathOrStr = Union[Path, str] -Replacements = List[Tuple[PathOrStr, str]] -StrReplacements = List[Tuple[str, str]] -Excludes = Tuple[str, ...] +PathOrStr = Path | str +Replacements = Iterable[tuple[PathOrStr, str]] +StrReplacements = Iterable[tuple[str, str]] +Excludes = tuple[str, ...] DEFAULT_REF_PATH: Path = PRJ_PATH / "tests" / "refdata" @@ -84,7 +85,7 @@ } -def configure(ref_path: Optional[Path] = None, ref_update: Optional[bool] = None, excludes: Optional[Excludes] = None): +def configure(ref_path: Path | None = None, ref_update: bool | None = None, excludes: Excludes | None = None): """ Configure. @@ -102,12 +103,12 @@ def configure(ref_path: Optional[Path] = None, ref_update: Optional[bool] = None def assert_refdata( - testfunc, + testfunc: Callable, path: Path, - capsys=None, - caplog=None, - replacements: Optional[Replacements] = None, - excludes: Optional[List[str]] = None, + capsys: Any = None, + caplog: Any = None, + replacements: Replacements | None = None, + excludes: Iterable[str] | None = None, ): # pylint: disable=too-many-arguments """ Compare Output of `testfunc` generated at `path` with reference. @@ -126,12 +127,12 @@ def assert_refdata( excludes: Files and directories to be excluded. """ # pylint: disable=too-many-locals - ref_path = CONFIG["ref_path"] / testfunc.__module__ / testfunc.__name__ + ref_path = CONFIG["ref_path"] / testfunc.__module__ / testfunc.__name__ # type: ignore[operator] ref_path.mkdir(parents=True, exist_ok=True) - rplcs: Replacements = replacements or () # type: ignore + rplcs: Replacements = replacements or () # type: ignore[assignment] path_rplcs: StrReplacements = [(srch, rplc) for srch, rplc in rplcs if isinstance(srch, str)] gen_rplcs: Replacements = [(PRJ_PATH, "$PRJ"), (path, "$GEN"), *rplcs] - gen_excludes: Excludes = [*CONFIG["excludes"], *(excludes or [])] # type: ignore + gen_excludes: Excludes = (*CONFIG["excludes"], *(excludes or [])) with TemporaryDirectory() as temp_dir: gen_path = Path(temp_dir) @@ -147,7 +148,8 @@ def assert_refdata( (gen_path / "stderr.txt").write_text(captured.err) if caplog: - with open(gen_path / "logging.txt", "w", encoding="utf-8") as file: + logpath = gen_path / "logging.txt" + with logpath.open("w", encoding="utf-8") as file: for record in caplog.records: file.write(f"{record.levelname:7s} {record.name} {record.message}\n") caplog.clear() @@ -163,7 +165,7 @@ def assert_refdata( assert_paths(ref_path, gen_path, excludes=excludes) -def assert_paths(ref_path: Path, gen_path: Path, excludes: Optional[List[str]] = None): +def assert_paths(ref_path: Path, gen_path: Path, excludes: Iterable[str] | None = None): """ Compare Output of `ref_path` with `gen_path`. @@ -174,12 +176,12 @@ def assert_paths(ref_path: Path, gen_path: Path, excludes: Optional[List[str]] = Keyword Args: excludes: Files and directories to be excluded. """ - diff_excludes: Excludes = [*CONFIG["excludes"], *(excludes or [])] # type: ignore + diff_excludes: Excludes = (*CONFIG["excludes"], *(excludes or [])) try: cmd = ["diff", "-ru", str(ref_path), str(gen_path)] for exclude in diff_excludes: cmd.extend(("--exclude", exclude)) - subprocess.run(cmd, check=True, capture_output=True) + subprocess.run(cmd, check=True, capture_output=True) # noqa: S603 except subprocess.CalledProcessError as error: raise AssertionError(error.stdout.decode("utf-8")) from None @@ -214,7 +216,7 @@ def _replace_path(path: Path, replacements: StrReplacements): def _replace_content(path: Path, replacements: Replacements): """Replace ``replacements`` for text files in ``path``.""" - # pre-compile regexs and create substition functions + # pre-compile regexs and create substitution functions regexs = [(_compile(search), _substitute_func(replace)) for search, replace in replacements] # search files and replace for sub_path in tuple(path.glob("**/*")): diff --git a/tests/__init__.py b/tests/__init__.py index 5dbc072..96e6fb6 100644 --- a/tests/__init__.py +++ b/tests/__init__.py @@ -21,3 +21,4 @@ # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE # SOFTWARE. # +"""Tests.""" diff --git a/tests/refdata/tests.test_main/test_replace/file.txt b/tests/refdata/tests.test_main/test_replace/file.txt index 3038cb1..658b34e 100644 --- a/tests/refdata/tests.test_main/test_replace/file.txt +++ b/tests/refdata/tests.test_main/test_replace/file.txt @@ -1,4 +1,4 @@ Something RAINBOW Multiple Lines With $GEN/inside - $OTHER_PATH too \ No newline at end of file + $OTHER_PATH too diff --git a/tests/test_main.py b/tests/test_main.py index 53baf1d..6706009 100644 --- a/tests/test_main.py +++ b/tests/test_main.py @@ -22,18 +22,19 @@ # SOFTWARE. # """Basic Testing.""" + import logging import sys from pathlib import Path from unittest.mock import patch from pytest import mark, raises - from test2ref import ( CONFIG, DEFAULT_EXCLUDES, DEFAULT_REF_PATH, DEFAULT_REF_UPDATE, + Replacements, assert_paths, assert_refdata, configure, @@ -139,15 +140,14 @@ def test_caplog(tmp_path: Path, caplog, fail: bool): def test_replace(tmp_path: Path): """Test Replacements.""" - one_path = tmp_path / "one" / "deep" other_path = tmp_path / "other" one_path.mkdir(parents=True) - (one_path / "file.txt").write_text(f"Something\n Over Multiple Lines\n With {one_path}/inside\n {other_path} too") + (one_path / "file.txt").write_text(f"Something\n Over Multiple Lines\n With {one_path}/inside\n {other_path} too\n") configure(ref_update=False) - replacements = [ + replacements: Replacements = [ (other_path, "$OTHER_PATH"), ("Over", "RAINBOW"), ] @@ -156,7 +156,6 @@ def test_replace(tmp_path: Path): def test_default_excludes(tmp_path: Path): """Text Default Excludes.""" - (tmp_path / "file.txt").touch() (tmp_path / "__pycache__").mkdir() (tmp_path / "__pycache__" / "file.pyc").touch() diff --git a/tests/util.py b/tests/util.py index 677ad77..9bb3923 100644 --- a/tests/util.py +++ b/tests/util.py @@ -22,14 +22,16 @@ # SOFTWARE. # """Test Utilities.""" + import contextlib import os +import pathlib @contextlib.contextmanager def chdir(path): """Change Working Directory to ``path``.""" - curdir = os.getcwd() + curdir = pathlib.Path.cwd() try: os.chdir(path) yield