Update for SRA Toolkit 3.0.0

Access to SRA was updated

Update for NGS v.2.11.0

Update for NGS v.2.11.0

New saute and saute_prot assemblers

SAUTE is a de Bruijn graph based target enriched de-novo assembler designed for assembling genomic and RNA-seq reads sequenced using Illumina. SAUTE has two flavors - one uses nucleotide reference sequences and the other protein sequences. In both cases, the output is nucleotide assemblies.

SKESA 2.4.0

1. Automatic recognition of read fasta/fastq files.
2. New tools: gfa_connector and kmercounter

SKESA v2.3.0

The input of reads from files is simplified:

1. The option --use_paired_ends is needed only with a single input file containing both mates.
2. Gzipped files are recognized automatically.

SKESA v2.2.1

New version

SKESA v2.2

Add release info