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Change x-axis label for volcano plot #161

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bnovotny opened this issue Jan 13, 2022 · 3 comments
Open

Change x-axis label for volcano plot #161

bnovotny opened this issue Jan 13, 2022 · 3 comments
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enhancement New feature or request

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@bnovotny
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Is your feature request related to a problem? Please describe.
Currently the volcano plot's x-axis label is set to "log2FC" but for my data the x-axis is actually showing the effects from linear models.

Describe the solution you'd like
The ability to specify the x-axis label for the volcano plot.

@ergonyc ergonyc added the enhancement New feature or request label Jan 19, 2022
@ergonyc
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ergonyc commented Jan 26, 2022

How many types of measures might we expect to see on the x-axis across data sets? If there's a few types we can enumerate them and have the type curated (or tested for)... if it could be alot we might need to have the label / scale as a "curated" with the data property.

Thoughts?

@bnovotny
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LogFC is definitely the most common, so perhaps a default to logFC with the option to curate a custom label? I don't know of a definitive list of possible x-axis measures, but I would be interested to hear others' thoughts as well.

@ergonyc
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ergonyc commented Feb 10, 2022

@bnovotny @ricoderks just bumping this issue. I think it might be a good topic to quick cover in next weeks "brain trust"

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