Reorganize repository

The Crate theme did a lot that we do not need to do.

.gitignore

@@ -1,18 +1,20 @@
+*.py[co]
 .DS_Store
-.installed.cfg
+_build
+build
+dist
 *.egg-info
-*.pyc
-bin/
-blackbox
-build/
-develop-eggs/
-dist/
-docs
-docs/
-eggs
-env/
-node_modules/
-out/
-parts/
-sql
-src/crate/sphinx
+*~
+*.bak
+*.swp
+.cache
+.tox
+.vagrant
+*.class
+*.eggs/
+.coverage
+htmlcov
+*.dist-info/
+.vscode
+.idea
+.pytest_cache/