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Releases: neurobagel/bagel-cli

v0.11.5

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@neurobagel-bot neurobagel-bot released this 05 Jun 19:23

🏠 Internal

Authors: 2

v0.11.4

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@neurobagel-bot neurobagel-bot released this 18 Feb 20:33

🚀 Enhancements

Authors: 1

v0.11.3

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@neurobagel-bot neurobagel-bot released this 16 Feb 06:10

🚀 Enhancements

  • [ENH] Warn instead of error when email and URL fields have empty strings #646 (@alyssadai)

Authors: 1

v0.11.2

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@neurobagel-bot neurobagel-bot released this 13 Feb 17:02

🚀 Enhancements

  • [ENH] More informative warnings for invalid vs unsupported BIDS suffixes in bids2tsv command #628 (@alyssadai)

Authors: 1

v0.11.1

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@neurobagel-bot neurobagel-bot released this 12 Jan 19:42

🐛 Bug Fixes

  • [FIX] Support string references under ReferencesAndLinks in dataset description file #631 (@alyssadai)

Authors: 1

v0.11.0

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@neurobagel-bot neurobagel-bot released this 08 Jan 19:35

💥 Breaking Changes

  • [ENH] Replace --name and --portal with required arg for data description file #623 (@alyssadai @surchs)

🏠 Internal

Authors: 2

v0.10.2

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@neurobagel-bot neurobagel-bot released this 27 Nov 16:04

🚀 Enhancements

  • [REF] Fetch supported BIDS terms from neurobagel/communities instead of hardcoding #611 (@alyssadai)
  • [MNT] Update default JSONLD output filenames #604 (@alyssadai)

🏠 Internal

  • [REF] Rename references to Neurobagel "category" to "standardized variable" #595 (@alyssadai)

🔩 Dependency Updates

Authors: 1

v0.10.1

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@neurobagel-bot neurobagel-bot released this 20 Nov 15:25

🧪 Tests

🔩 Dependency Updates

  • [FIX] Require Python <3.14 to avoid Pandera compatibility issues #601 (@alyssadai)

Authors: 1

v0.10.0

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@neurobagel-bot neurobagel-bot released this 14 Nov 22:12

🚀 Enhancements

  • [ENH] Add harmonize-pheno command to create a harmonized TSV from a raw TSV & data dictionary #591 (@alyssadai)

🐛 Bug Fixes

  • [FIX] Ensure git is installed in nightly Dockerfile for dynamic versioning #584 (@alyssadai)
  • [FIX] Include .git for nightly Docker build to enable version detection #583 (@alyssadai)
  • [FIX] Build nightly Docker image from source rather than PyPI #580 (@alyssadai)

🏠 Internal

  • [REF] Use generic fixture for output JSONLD path in integration tests #581 (@alyssadai)

Authors: 1

v0.9.2

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@neurobagel-bot neurobagel-bot released this 04 Nov 04:26

🐛 Bug Fixes

  • [FIX] Ensure bagel bids exits gracefully for BIDS table missing required column #579 (@alyssadai)

Authors: 1