neurodata

Repositories

• brainlit

  This repository is a container of methods that Neurodata uses to expose their open-source code while it is in the process of being merged with larger scientific libraries such as scipy, scikit-image, or scikit-learn. Additionally, methods for computational neuroscience on brains too specific for a general scientific library can be found here, su…
  Python Apache-2.0 11 9 62 (6 issues need help) 2 Updated Jan 27, 2021

• hyppo

  hyppo package repository

  python data-science independence hypothesis-testing hacktoberfest ksample-testing
  Python Apache-2.0 7 66 27 (2 issues need help) 0 Updated Jan 26, 2021

• nd_ed

  Collection of educational resources. Primarily focused on skills that are helpful in the NeuroData lab or the Neuro Data Design course at Johns Hopkins University.
  MIT 6 9 2 0 Updated Jan 26, 2021

• ProgLearn

  NeuroData's package for exploring and using progressive learning algorithms

  deep-neural-networks deep-learning classification transfer-learning decision-trees domain-adaptation random-forests
  Jupyter Notebook MIT 29 22 49 3 Updated Jan 26, 2021

• m2g

  NeuroData's MRI to Graphs (m2g) - structural connectome estimation package and pipeline
  Jupyter Notebook Apache-2.0 29 46 34 3 Updated Jan 25, 2021

• MCC

  Reproducible code for "Multiscale Comparative Connectomics" https://arxiv.org/abs/2011.14990

  connectomics graph-statistics
  Jupyter Notebook MIT 0 2 0 0 Updated Jan 25, 2021

• maggot_connectome

  Paper on modeling the larval Drosophila connectome
  Python MIT 0 1 0 0 Updated Jan 24, 2021

• task-similarity

  a repo for exploring task-similarity and its utility for downstream inference
  Jupyter Notebook 0 2 2 0 Updated Jan 23, 2021

• CloudReg

  CloudReg
  C++ Apache-2.0 3 2 0 0 Updated Jan 22, 2021

• neurodata.io

  Homepage for NeuroData

  website outreach static-site neuroimaging
  HTML Apache-2.0 5 5 23 2 Updated Jan 21, 2021

• SPORF

  This is the implementation of Sparse Projection Oblique Randomer Forest

  python r cpp random-forest classification decision-trees
  C++ Apache-2.0 37 69 88 8 Updated Jan 21, 2021

• maggot_models

  Modeling Drosophila larval connectomes
  Jupyter Notebook BSD-3-Clause 5 2 27 (4 issues need help) 0 Updated Jan 21, 2021

• meditation
  Jupyter Notebook 0 0 0 0 Updated Jan 19, 2021

• kdg
  Jupyter Notebook 0 1 2 0 Updated Jan 19, 2021

• nd-faq

  A collection of frequently asked questions (and answers) for prospective PhD students considering joining NeuroData and/or BME@JHU.
  1 0 0 0 Updated Jan 19, 2021

• primitives-interfaces

  A mirror of D3M's primitives-interfaces
  Python Apache-2.0 4 0 10 (1 issue needs help) 0 Updated Jan 18, 2021

• hcp_pipelines
  Python MIT 0 0 0 0 Updated Jan 12, 2021

• hyppo-papers
  Jupyter Notebook Apache-2.0 0 1 0 0 Updated Jan 9, 2021

• dirtysecrets

  dirty secrets of data science
  MIT 1 3 0 0 Updated Jan 8, 2021

• batch_effects
  HTML Apache-2.0 0 1 1 0 Updated Jan 7, 2021

• dmriprep

  Forked from dPys/dmriprep

  preprocessing for dMRI data
  Python Apache-2.0 11 0 0 0 Updated Jan 4, 2021

• j1c-experiments
  Jupyter Notebook Apache-2.0 0 0 0 0 Updated Dec 23, 2020

• notebooks

  Place to host notebooks
  Jupyter Notebook Apache-2.0 0 0 1 0 Updated Dec 15, 2020

• talks

  NeuroData Talks
  HTML 7 2 1 1 Updated Dec 9, 2020

• connectocross
  MIT 0 1 8 0 Updated Dec 7, 2020

• neuroparc
  Jupyter Notebook 7 33 14 1 Updated Dec 2, 2020

• hierarchical
  Jupyter Notebook 0 1 0 0 Updated Nov 12, 2020

• lol

  package for dimensionality reduction under supervised data scenarios
  R GPL-3.0 13 11 3 0 Updated Nov 5, 2020

• neuroglancer

  Forked from google/neuroglancer

  WebGL-based viewer for volumetric data
  TypeScript Apache-2.0 181 0 0 0 Updated Nov 1, 2020

• hyppo-benchmarks
  Jupyter Notebook 0 2 0 0 Updated Oct 22, 2020