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trvrb committed Sep 8, 2019
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[![Build Status](](
[![PyPI version](](
[![License: AGPL v3](](

# Introduction

Nextstrain is an open-source project to harness the scientific and public health potential of pathogen genome data.
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Resulting data and inferences are available live at the website [](
Documentation is available at [](

# Augur

*Definition: One held to foretell events by omens.*
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It provides a collection of commands which are designed to be composable into larger processing pipelines.
Documentation for augur is available at [](

## Installation

Augur is written in Python 3 and requires at least Python 3.4.

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