From d6cf607331d24ce419015d15b944222f15e4bf03 Mon Sep 17 00:00:00 2001
From: Victor Lin <13424970+victorlin@users.noreply.github.com>
Date: Thu, 12 Jan 2023 15:47:17 -0800
Subject: [PATCH] setup-miniconda: Speed up conda install

Specify the channels only where needed (they don't need to be searched
for conda-libmamba-solver).
---
 .github/actions/setup-integration-tests/action.yaml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/.github/actions/setup-integration-tests/action.yaml b/.github/actions/setup-integration-tests/action.yaml
index 4afa9bf7..bb4aee11 100644
--- a/.github/actions/setup-integration-tests/action.yaml
+++ b/.github/actions/setup-integration-tests/action.yaml
@@ -25,7 +25,6 @@ runs:
     - uses: conda-incubator/setup-miniconda@v2
       with:
         python-version: ${{ inputs.python-version }}
-        channels: conda-forge,bioconda
         activate-environment: test
 
     - run: |
@@ -44,7 +43,7 @@ runs:
 
     # Install software for the "ambient" runner; not supported on Windows.
     - if: runner.os != 'Windows'
-      run: conda install augur auspice snakemake
+      run: conda install -c bioconda -c conda-forge augur auspice snakemake
       shell: bash -l -eo pipefail {0}
 
     - run: conda info