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Update Zika notes

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1 parent e59e26f commit 599aaf508b401e7b759c681175cae6382dca8323 @trvrb trvrb committed Jan 9, 2017
Showing with 4 additions and 4 deletions.
  1. +4 −4 ZIKA.md
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@@ -1,6 +1,6 @@
# ZIKA Pipeline Notes
-## Update documents in VDB
+## Update
* Update citation fields
* `python vdb/zika_update.py -db vdb -v zika --update_citations`
@@ -11,13 +11,13 @@
* `python vdb/zika_update.py -db vdb -v zika --update_locations`
* Updates `division`, `country`, `region`, `latitude`, `longitude` fields
-## Download documents from VDB
+## Download
-* `python vdb/zika_download.py -db vdb -v zika --fstem zika`
+ python vdb/zika_download.py -db vdb -v zika --fstem zika
## Upload
-### [ViPR sequences](ttps://www.viprbrc.org/brc/vipr_genome_search.spg?method=ShowCleanSearch&decorator=flavi_zika)
+### [ViPR sequences](https://www.viprbrc.org/brc/vipr_genome_search.spg?method=ShowCleanSearch&decorator=flavi_zika)
1. Download sequences
* Select year >= 2013 and genome length >= 5000

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