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Added avian synonym for H7N9 virus.

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huddlej committed Oct 4, 2017
1 parent 18892b0 commit d23ae6a2c3388ab7d37761aeabd5c429d83415ad
Showing with 2 additions and 2 deletions.
  1. +2 −2 download_all.py
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@@ -96,7 +96,7 @@
print(call)
os.system(call)
elif params.virus == "h7n9":
elif params.virus == "h7n9" or params.virus == "avian":
os.system("python vdb/h7n9_download.py -db vdb -v h7n9 --select locus:PB2 --fstem h7n9_pb2")
os.system("python vdb/h7n9_download.py -db vdb -v h7n9 --select locus:PB1 --fstem h7n9_pb1")
@@ -108,4 +108,4 @@
os.system("python vdb/h7n9_download.py -db vdb -v h7n9 --select locus:NS --fstem h7n9_ns")
else:
print("%s is an invalid virus type.\nValid viruses are flu, ebola, dengue, zika, and h7n9."%(params.virus))
print("%s is an invalid virus type.\nValid viruses are flu, ebola, dengue, zika, h7n9, and avian."%(params.virus))

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