From 0d54e139f520677f34a243931c97483ca41da613 Mon Sep 17 00:00:00 2001 From: John Huddleston Date: Wed, 7 Feb 2018 10:48:04 -0800 Subject: [PATCH] Run H3N2 builds with segment-specific FASTA files and public titers. --- config.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/config.json b/config.json index 7e5b6d7..d78f594 100644 --- a/config.json +++ b/config.json @@ -33,7 +33,7 @@ "lineage": ["h3n2", "h1n1pdm", "vic", "yam"], "segment": ["ha"], "resolution": ["3y", "6y", "12y"], - "prepare": "--sequences ../../../fauna/data/{lineage}.fasta --titers ../../../fauna/data/{lineage}_hi_titers.tsv --complete_frequencies", + "prepare": "--sequences ../../../fauna/data/{lineage}_{segment}.fasta --titers ../../../fauna/data/{lineage}_public_hi_cell_titers.tsv --complete_frequencies", "fauna": " --virus {virus} --segments {segment} --sequences --titers" }, {