From 3c56b4365643650a1081212885892498272592dd Mon Sep 17 00:00:00 2001
From: John Huddleston <huddlej@gmail.com>
Date: Sun, 5 Apr 2020 20:20:23 -0700
Subject: [PATCH] Update README to reflect deprecation

---
 README.md | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/README.md b/README.md
index 476ec50..cb12c4a 100644
--- a/README.md
+++ b/README.md
@@ -1,3 +1,7 @@
+## Note about deprecation
+
+This project has been deprecated and superseded by the [nextstrain/cli](https://github.com/nextstrain/cli).
+
 ## Introduction
 
 The nextstrain project is an attempt to make flexible informatic pipelines and visualization tools to track ongoing pathogen evolution as sequence data emerges. The nextstrain project derives from [nextflu](https://github.com/blab/nextflu), which was specific to influenza evolution.