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Update with division phylogeo

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trvrb committed Feb 12, 2020
1 parent 556a243 commit 127e778e8ad90262100eb062ea85ad308d7916e0
Showing with 31 additions and 14 deletions.
  1. +1 −1 Snakefile
  2. +30 −13 config/weights.tsv
@@ -249,7 +249,7 @@ rule traits:
output:
node_data = "results/traits.json",
params:
columns = "country",
columns = "division",
sampling_bias_correction = 2
shell:
"""
@@ -1,13 +1,30 @@
China 1.0
Taiwan 0.1
Thailand 0.1
Japan 0.1
South Korea 0.1
Singapore 0.1
Australia 0.1
France 0.1
Belgium 0.1
Germany 0.1
United Kingdom 0.1
Finland 0.1
USA 0.1
division Hubei 50.0
division Jiangxi 1.0
division Chongqing 1.0
division Sichuan 1.0
division Yunnan 1.0
division Jiangsu 1.0
division Zhejiang 1.0
division Guangdong 1.0
division Taiwan 1.0
division Nonthaburi 1.0
division Aichi 1.0
division Tokyo 1.0
division Kyoto 1.0
division Gyeonggi 1.0
division Singapore 1.0
division Thanh Hoa 1.0
division Queensland 1.0
division New South Wales 1.0
division Victoria 1.0
division Ile De France 1.0
division Flanders 1.0
division Bavaria 1.0
division England 1.0
division Lapland 1.0
division Washington 1.0
division California 1.0
division Arizona 1.0
division Illinois 1.0
division Wisconsin 1.0
division Massachusetts 1.0

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