diff --git a/nextstrain_profiles/nextstrain-gisaid/builds.yaml b/nextstrain_profiles/nextstrain-gisaid/builds.yaml index b7b0e356b..5750e0a60 100644 --- a/nextstrain_profiles/nextstrain-gisaid/builds.yaml +++ b/nextstrain_profiles/nextstrain-gisaid/builds.yaml @@ -185,7 +185,7 @@ subsampling: nextstrain_region_asia_grouped_by_division_1m: # Early focal samples for Asia asia_early: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 700 max_date: "--max-date 1M" @@ -198,7 +198,7 @@ subsampling: exclude: "--exclude-where 'region=Asia'" # Recent focal samples for Asia asia_recent: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 2800 min_date: "--min-date 1M" @@ -219,7 +219,7 @@ subsampling: nextstrain_region_asia_grouped_by_division_2m: # Early focal samples for Asia asia_early: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 700 max_date: "--max-date 2M" @@ -232,7 +232,7 @@ subsampling: exclude: "--exclude-where 'region=Asia'" # Recent focal samples for Asia asia_recent: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 2800 min_date: "--min-date 2M" @@ -253,7 +253,7 @@ subsampling: nextstrain_region_asia_grouped_by_division_6m: # Early focal samples for Asia asia_early: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 700 max_date: "--max-date 6M" @@ -266,7 +266,7 @@ subsampling: exclude: "--exclude-where 'region=Asia'" # Recent focal samples for Asia asia_recent: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 2800 min_date: "--min-date 6M" @@ -285,7 +285,7 @@ subsampling: nextstrain_region_asia_grouped_by_division_all_time: # Focal samples for Asia asia: - group_by: "country year month" + group_by: "country division year month" group_by_weights: "data/country_population_weights.tsv" max_sequences: 3500 exclude: "--exclude-where 'region!=Asia'"