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Merge pull request #20 from nextstrain/misc-tweaks
Misc tweaks
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7 additions
and 1,692 deletions.
- 0 old-src/__init__.py
- +0 −34 old-src/attribution.py
- +0 −85 old-src/cluster.py
- +0 −454 old-src/dataset.py
- +0 −117 old-src/default_config.py
- +0 −77 old-src/entrez.py
- +0 −95 old-src/run.py
- +0 −51 old-src/sample.py
- +0 −63 old-src/sequence.py
- +0 −33 old-src/strain.py
- +0 −64 old-src/temporary.py
- +0 −46 old-src/unit.py
- 0 old-src/utils/__init__.py
- +0 −120 old-src/utils/colorLogging.py
- +0 −30 old-src/utils/file_readers.py
- +0 −213 old-src/utils/fix_functions.py
- +0 −170 old-src/utils/genbank_parsers.py
- +0 −17 old-src/utils/misc.py
- +0 −20 old-src/utils/populate_lookups.py
- +2 −0 requirements-locked.txt
- +3 −2 requirements.txt
- +1 −0 src/run.py
- +1 −1 src/utils/misc.py
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