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clarify the geometry documentation as agreed upon at 2014 NIAC #397

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@prjemian

The specification of geometry and axis coordinates needs to be clarified in the manual, as revisions were agreed upon at the 2014 NIAC meeting.

Use this as the starting point
http://www.bernstein-plus-sons.com/software/CBF/doc/cif_img_1.7.8.html#axis

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