v1.3.0 - 2023-10-24

What's Changed

• Bump versions after 1.2.0 release by @pinin4fjords in #114
• Fix low replication by @pinin4fjords in #117
• Template update for nf-core/tools v2.8 by @pinin4fjords in #124
• Important! Template update for nf-core/tools v2.8 by @nf-core-bot in #121
• Add spaces to satisfy nf-core download for singularity by @pinin4fjords in #126
• Posible fix for issue #127 by @ctuni in #128
• Module updates to fit with recent registry changes by @pinin4fjords in #129
• document reasons for lack of differential expression by @pinin4fjords in #130
• Improve gtf to table configurability by @pinin4fjords in #131
• Updated Deseq2 params by @WackerO in #137
• Fix control_features and sizefactors_from_controls by @WackerO in #144
• Important! Template update for nf-core/tools v2.9 by @nf-core-bot in #145
• Fix up sample exclusion options by @pinin4fjords in #132
• Update README.md - add ref to nf-core/rnaseq and Affymetrix by @smoe in #149
• Update modules by @WackerO in #151
• Trivial change, not even a typo: Update README.md - Inserted missing blank. by @smoe in #146
• Updated env versions of rmarkdownnotebook by @WackerO in #154
• Soft matrix support by @azedinez in #136
• Template update 2.10 - conflicts solving by @WackerO in #160
• Important! Template update for nf-core/tools v2.10 by @nf-core-bot in #158
• Correct typo by @pinin4fjords in #162
• Point to shinyngs example in docs by @pinin4fjords in #161
• Module update: matrixfilter by @WackerO in #159
• Rlog + other small fixes by @pinin4fjords in #164
• Add proteus module for maxquant data analysis by @WackerO in #147
• Output notebook by @pinin4fjords in #167
• Affy docs by @pinin4fjords in #169
• Update metro map by @pinin4fjords in #172
• Deseq2 tip by @pinin4fjords in #173
• Fix metro map by @pinin4fjords in #174
• Don't use contrasts directly from the input channel by @pinin4fjords in #175
• Bump shinyngs by @pinin4fjords in #176
• Release v1.3.0 by @pinin4fjords in #177
• Removed shiny error for proteus runs by @WackerO in #179
• v1.3.0 post-review by @pinin4fjords in #180
• Dev -> master for v1.3.0 by @pinin4fjords in #178

New Contributors

• @nf-core-bot made their first contribution in #121
• @ctuni made their first contribution in #128
• @smoe made their first contribution in #149
• @azedinez made their first contribution in #136

Full Changelog: 1.2.0...1.3.0