========================================
 nf-core/eager v2.1.0dev
========================================
Run Name: nice_knuth

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## nf-core/eager execution completed unsuccessfully! ##

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The exit status of the task that caused the workflow execution to fail was: 127.
The full error message was:

Error executing process > 'makeSeqDict (hg19_MT.fasta)'

Caused by:
  Process `makeSeqDict (hg19_MT.fasta)` terminated with an error exit status (127)

Command executed:

  picard CreateSequenceDictionary R=hg19_MT.fasta O="hg19_MT.dict"

Command exit status:
  127

Command output:
  (empty)

Command error:
  env: singularity: No such file or directory

Work dir:
  /projects1/users/fellows/nextflow/eager2/my_test/work/de/89add2cce930c4bca1c87924a0e869

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`



####################################################
## nf-core/eager execution completed unsuccessfully! ##
####################################################
The exit status of the task that caused the workflow execution to fail was: 127.
The full error message was:

Error executing process > 'makeSeqDict (hg19_MT.fasta)'

Caused by:
  Process `makeSeqDict (hg19_MT.fasta)` terminated with an error exit status (127)

Command executed:

  picard CreateSequenceDictionary R=hg19_MT.fasta O="hg19_MT.dict"

Command exit status:
  127

Command output:
  (empty)

Command error:
  env: singularity: No such file or directory

Work dir:
  /projects1/users/fellows/nextflow/eager2/my_test/work/de/89add2cce930c4bca1c87924a0e869

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`





The workflow was completed at Mon Nov 12 10:05:40 CET 2018 (duration: 5m 2s)

The command used to launch the workflow was as follows:

  nextflow run nf-core/eager --reads /projects1/users/fellows/nextflow/eager2/my_test/data/ABM006.A0101/*_R{1,2}*fastq.gz --pairedEnd --fasta /projects1/users/fellows/nextflow/eager2/my_test/references/hg19_MT.fasta --outdir /projects1/users/fellows/nextflow/eager2/my_test/output_eager2 -profile shh,singularity --max_cpus 4 --max_memory 16G -r shh-profile



Pipeline Configuration:
-----------------------
 - Pipeline Name: nf-core/eager
 - Pipeline Version: 2.1.0dev
 - Run Name: nice_knuth
 - Reads: /projects1/users/fellows/nextflow/eager2/my_test/data/ABM006.A0101/*_R{1,2}*fastq.gz
 - Fasta Ref: /projects1/users/fellows/nextflow/eager2/my_test/references/hg19_MT.fasta
 - Data Type: Paired-End
 - Max Memory: 16G
 - Max CPUs: 4
 - Max Time: 2d
 - Output dir: /projects1/users/fellows/nextflow/eager2/my_test/output_eager2
 - Working dir: /projects1/users/fellows/nextflow/eager2/my_test/work
 - Container Engine: singularity
 - Container: nfcore/eager:latest
 - Current home: /projects1/clusterhomes/fellows
 - Current user: fellows
 - Current path: /projects1/users/fellows/nextflow/eager2/my_test
 - Script dir: /projects1/clusterhomes/fellows/.nextflow/assets/nf-core/eager
 - Config Profile: shh,singularity
 - Date Started: Mon Nov 12 10:00:38 CET 2018
 - Date Completed: Mon Nov 12 10:05:40 CET 2018
 - Pipeline script file path: /projects1/clusterhomes/fellows/.nextflow/assets/nf-core/eager/main.nf
 - Pipeline script hash ID: d5a50b3dcc7a6954de187c51118dec4f
 - Pipeline repository Git URL: https://github.com/nf-core/eager.git
 - Pipeline repository Git Commit: 01cdc8f8a204779e2369c6796bb9a86572c8b1b1
 - Pipeline Git branch/tag: shh-profile
 - Nextflow Version: 0.32.0
 - Nextflow Build: 4897
 - Nextflow Compile Timestamp: 27-09-2018 10:17 UTC

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nf-core/eager
https://github.com/nf-core/eager