From eaae26589fa97d15871fb9720351fb8690d15140 Mon Sep 17 00:00:00 2001 From: maxibor Date: Tue, 7 Jan 2020 11:39:57 +0100 Subject: [PATCH 1/2] update env to prepare for PR --- environment.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/environment.yml b/environment.yml index a1eb6c206..be57fbf86 100644 --- a/environment.yml +++ b/environment.yml @@ -35,4 +35,6 @@ dependencies: - bioconda::sexdeterrmine=1.1.1 - bioconda::multivcfanalyzer=0.85.1 - bioconda::hops=0.33 + - conda-forge::biopython=1.75 + - conda-forge::xopen=0.8.4 #Missing Schmutzi,snpAD From e7083f65af78c0de9441cc902f5946f8c265e8e4 Mon Sep 17 00:00:00 2001 From: maxibor Date: Tue, 7 Jan 2020 11:46:52 +0100 Subject: [PATCH 2/2] update changelog --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 6c48a0e47..360c10b7e 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -24,6 +24,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. * Fancy new logo from [ZandraFagernas](https://github.com/ZandraFagernas) * [#286](https://github.com/nf-core/eager/issues/286) - Adds pipeline-specific profiles (loaded from nf-core configs) * [#310](https://github.com/nf-core/eager/issues/310) - Generalises base.config +* [#326](https://github.com/nf-core/eager/pull/326) - Add Biopython and [xopen](https://github.com/marcelm/xopen/) dependancies ### `Fixed`