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@apeltzer apeltzer released this Jun 10, 2019

[2.0.7] - 2019-06-10

Added

  • #189 - Outputing unmapped reads in a fastq files with the --strip_input_fastq flag
  • #186 - Make FastQC skipping [possible]
    /(#182)
  • Merged in nf-core/tools release V1.6 template changes
  • A lot more automated tests using Travis CI
  • Don't ignore DamageProfiler errors anymore
  • #220 - Added post-mapping filtering statistics module and corresponding MultiQC statistics #217

Fixed

Dependencies

  • Added DeDup v0.12.5 (json support)
  • Added mtnucratio v0.5 (json support)
  • Updated Picard 2.18.27 -> 2.20.2
  • Updated GATK 4.1.0.0 -> 4.1.2.0
  • Updated damageprofiler 0.4.4 -> 0.4.5
  • Updated r-rmarkdown 1.11 -> 1.12
  • Updated fastp 0.19.7 -> 0.20.0
  • Updated qualimap 2.2.2b -> 2.2.2c
Assets 2
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