From 28a811586021f5c81639355c1fe4a6651a07ab17 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Martin=20M=C3=B8ller?=
 <108660347+MartinVad@users.noreply.github.com>
Date: Mon, 13 May 2024 16:43:42 +0200
Subject: [PATCH] Update `modules/gtdbtk_classifywf` to 2.4.0 (#5596)

* Update from version 2.3.2 to 2.4.0

gtdbtk was updated last month from 2.3.2 to 2.4.0+

* Update from conda version 2.3.2 to 2.4.0
---
 modules/nf-core/gtdbtk/classifywf/environment.yml | 2 +-
 modules/nf-core/gtdbtk/classifywf/main.nf         | 4 ++--
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/modules/nf-core/gtdbtk/classifywf/environment.yml b/modules/nf-core/gtdbtk/classifywf/environment.yml
index 8801269ee33..16b8dbb6dc7 100644
--- a/modules/nf-core/gtdbtk/classifywf/environment.yml
+++ b/modules/nf-core/gtdbtk/classifywf/environment.yml
@@ -4,4 +4,4 @@ channels:
   - bioconda
   - defaults
 dependencies:
-  - bioconda::gtdbtk=2.3.2
+  - bioconda::gtdbtk=2.4.0
diff --git a/modules/nf-core/gtdbtk/classifywf/main.nf b/modules/nf-core/gtdbtk/classifywf/main.nf
index 14dd28a4fd0..9fc7a32df7f 100644
--- a/modules/nf-core/gtdbtk/classifywf/main.nf
+++ b/modules/nf-core/gtdbtk/classifywf/main.nf
@@ -5,8 +5,8 @@ process GTDBTK_CLASSIFYWF {
     // WARN: Version information not provided by tool on CLI. Please update version string below when bumping container versions.
     conda "${moduleDir}/environment.yml"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/gtdbtk:2.3.2--pyhdfd78af_0' :
-        'biocontainers/gtdbtk:2.3.2--pyhdfd78af_0' }"
+        'https://depot.galaxyproject.org/singularity/gtdbtk:2.4.0--pyhdfd78af_1' :
+        'biocontainers/gtdbtk:2.4.0--pyhdfd78af_1' }"
 
     input:
     tuple val(meta), path("bins/*")