From 6b3233501bb090ab2c7a45c7a75fce5be8d0d45e Mon Sep 17 00:00:00 2001 From: Robert Allaway Date: Wed, 7 Feb 2024 08:36:06 -0600 Subject: [PATCH] add back dropped parens --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index c46b0af13a..f28c2e2238 100644 --- a/README.md +++ b/README.md @@ -36,7 +36,7 @@ Depending on the options and samples provided, the pipeline can currently perfor - Map Reads to Reference (`BWA-mem`, `BWA-mem2`, `dragmap` or `Sentieon BWA-mem`) - Process BAM file (`GATK MarkDuplicates`, `GATK BaseRecalibrator` and `GATK ApplyBQSR` or `Sentieon LocusCollector` and `Sentieon Dedup`) - Summarise alignment statistics (`samtools stats`, `mosdepth`) -- Variant calling (enabled by `--tools`, see [compatibility](https://nf-co.re/sarek/latest/docs/usage#which-variant-calling-tool-is-implemented-for-which-data-type): +- Variant calling (enabled by `--tools`, see [compatibility](https://nf-co.re/sarek/latest/docs/usage#which-variant-calling-tool-is-implemented-for-which-data-type)): - `ASCAT` - `CNVkit` - `Control-FREEC`