From 1cdd81bb85a960c3451ddeb8d0506a86921b93c6 Mon Sep 17 00:00:00 2001 From: Marcel Ribeiro-Dantas Date: Fri, 15 Jul 2022 11:17:12 +0200 Subject: [PATCH 1/2] Fix zenodo shield and link --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index aec34ff7..69d94fd9 100644 --- a/README.md +++ b/README.md @@ -3,7 +3,7 @@ [![GitHub Actions CI Status](https://github.com/nf-core/scrnaseq/workflows/nf-core%20CI/badge.svg)](https://github.com/nf-core/scrnaseq/actions?query=workflow%3A%22nf-core+CI%22) [![GitHub Actions Linting Status](https://github.com/nf-core/scrnaseq/workflows/nf-core%20linting/badge.svg)](https://github.com/nf-core/scrnaseq/actions?query=workflow%3A%22nf-core+linting%22) [![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?logo=Amazon%20AWS)](https://nf-co.re/scrnaseq/results) -[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8)](https://doi.org/10.5281/zenodo.XXXXXXX) +[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.3568187-1073c8)](https://doi.org/10.5281/zenodo.3568187) [![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A521.10.3-23aa62.svg)](https://www.nextflow.io/) [![run with conda](http://img.shields.io/badge/run%20with-conda-3EB049?logo=anaconda)](https://docs.conda.io/en/latest/) @@ -82,7 +82,7 @@ For further information or help, don't hesitate to get in touch on the [Slack `# ## Citations -If you use nf-core/scrnaseq for your analysis, please cite it using the following doi: [10.5281/zenodo.3568187](https://doi.org/10.5281/10.5281/zenodo.3568187) +If you use nf-core/scrnaseq for your analysis, please cite it using the following doi: [10.5281/zenodo.3568187](https://doi.org/10.5281/zenodo.3568187) The basic benchmarks that were used as motivation for incorporating the three available modular workflows can be found in [this publication](https://www.biorxiv.org/content/10.1101/673285v2). From 69f2730afd32a6d0336b6dd4eb54f871f8851352 Mon Sep 17 00:00:00 2001 From: Marcel Ribeiro-Dantas Date: Fri, 15 Jul 2022 11:21:24 +0200 Subject: [PATCH 2/2] Remove extra slack shield I removed the extra slack shield, and chose to stay the one that is used in other nf-core GitHub repositories such as rnaseq and eager. --- README.md | 2 -- 1 file changed, 2 deletions(-) diff --git a/README.md b/README.md index 69d94fd9..20f51240 100644 --- a/README.md +++ b/README.md @@ -15,8 +15,6 @@ [![Follow on Twitter](http://img.shields.io/badge/twitter-%40nf__core-1DA1F2?logo=twitter)](https://twitter.com/nf_core) [![Watch on YouTube](http://img.shields.io/badge/youtube-nf--core-FF0000?logo=youtube)](https://www.youtube.com/c/nf-core) -[![Join us on Slack](https://img.shields.io/badge/slack-nfcore/scrnaseq-blue.svg)](https://nfcore.slack.com/channels/scrnaseq) - ## Introduction **nf-core/scrnaseq** is a bioinformatics best-practice analysis pipeline for processing 10x Genomics single-cell RNA-seq data.