From 5148facc02e71c02b07a26316d11cd59f01dacc2 Mon Sep 17 00:00:00 2001
From: Gregor Sturm <mail@gregor-sturm.de>
Date: Thu, 30 Dec 2021 10:57:40 +0100
Subject: [PATCH] Fix kallistobus didn't run with multiple samples

---
 workflows/kallisto_bustools.nf | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/workflows/kallisto_bustools.nf b/workflows/kallisto_bustools.nf
index 48f6b87f..d0d8d6a7 100644
--- a/workflows/kallisto_bustools.nf
+++ b/workflows/kallisto_bustools.nf
@@ -137,8 +137,8 @@ workflow KALLISTO_BUSTOOLS {
     */
     KALLISTOBUSTOOLS_COUNT(
         ch_fastq,
-        ch_kallisto_index,
-        ch_kallisto_gene_map,
+        ch_kallisto_index.collect(),
+        ch_kallisto_gene_map.collect(),
         [],
         [],
         false,