Cannot switch to revision: 1.0.0

[mdeloger]

Hi @PeterBailey ,

I have just cloned the git repository of the "scrnaseq" pipeline and when I try to launch it, here the message I obtain :

nextflow run nf-core/scrnaseq -r 1.0.0 -profile conda,test
N E X T F L O W ~ version 19.10.0
Project nf-core/scrnaseq contains uncommitted changes -- Cannot switch to revision: 1.0.0

May I have some help please ?

Thank you in advance

[apeltzer]

Probably you cloned it once already and are stuck in a previous git head.

rm -rf ~/.nextflow/assets/nf-core/scrnaseq

and then repull ?

[mdeloger]

oh ok it was the .nextflow in the home and not the local one.
you are right, sorry

thank you :-)