From e3f1ad091fd5f554e7bd2ff3e3e60e67cf672cc7 Mon Sep 17 00:00:00 2001 From: mashehu Date: Thu, 9 May 2024 11:42:15 +0200 Subject: [PATCH 1/4] fix update script --- .github/workflows/update_components_template.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/update_components_template.yml b/.github/workflows/update_components_template.yml index 5ba513735..e2ecebfcb 100644 --- a/.github/workflows/update_components_template.yml +++ b/.github/workflows/update_components_template.yml @@ -22,11 +22,11 @@ jobs: run: pip install nf-core - name: Update modules - run: nf-core modules update --all + run: nf-core modules update --all --no-preview working-directory: nf_core/pipeline-template - name: Update subworkflows - run: nf-core subworkflows update --all + run: nf-core subworkflows update --all --no-preview working-directory: nf_core/pipeline-template # Commit the changes From 8aff96652d7324e8b23a9e955d2b06ddf18ff02a Mon Sep 17 00:00:00 2001 From: nf-core-bot Date: Thu, 9 May 2024 09:44:00 +0000 Subject: [PATCH 2/4] [automated] Update CHANGELOG.md --- CHANGELOG.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 18d03dde6..6b0fb914e 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -14,6 +14,8 @@ ### General +- fix update script ([#2968](https://github.com/nf-core/tools/pull/2968)) + ## [v2.14.0 - Tantalum Toad](https://github.com/nf-core/tools/releases/tag/2.14) - [2024-05-07] ### Template From 9e3ba7804a9ab1469eee88012c3eb5689a546739 Mon Sep 17 00:00:00 2001 From: nf-core-bot Date: Thu, 9 May 2024 09:44:50 +0000 Subject: [PATCH 3/4] [automated] Update CHANGELOG.md --- CHANGELOG.md | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 6b0fb914e..7f6729de1 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,6 +5,7 @@ ### Template - Don't cache pip in `linting.yml` ([#2961](https://github.com/nf-core/tools/pull/2961)) +- Fix template componenents update script in github action ([#2968](https://github.com/nf-core/tools/pull/2968)) ### Linting @@ -14,8 +15,6 @@ ### General -- fix update script ([#2968](https://github.com/nf-core/tools/pull/2968)) - ## [v2.14.0 - Tantalum Toad](https://github.com/nf-core/tools/releases/tag/2.14) - [2024-05-07] ### Template From ac5373a3227a2c4538c03fef1683d08ac81cce23 Mon Sep 17 00:00:00 2001 From: mashehu Date: Thu, 9 May 2024 11:47:04 +0200 Subject: [PATCH 4/4] fix changelog --- CHANGELOG.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 7f6729de1..2250963c6 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -5,7 +5,6 @@ ### Template - Don't cache pip in `linting.yml` ([#2961](https://github.com/nf-core/tools/pull/2961)) -- Fix template componenents update script in github action ([#2968](https://github.com/nf-core/tools/pull/2968)) ### Linting @@ -15,6 +14,8 @@ ### General +- Fix update github action for components in pipeline template ([#2968](https://github.com/nf-core/tools/pull/2968)) + ## [v2.14.0 - Tantalum Toad](https://github.com/nf-core/tools/releases/tag/2.14) - [2024-05-07] ### Template