Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Multiple `-1` with count() when multiple features/subfeatures are requested #63

Closed
unode opened this issue Apr 19, 2018 · 0 comments

Comments

@unode
Copy link
Member

commented Apr 19, 2018

This is related to #34.

The special case of -1 is currently written several times to the output.

With multiple subfeatures, there's an additional bug in that the -1 line doesn't include the 2 identifying prefixes:

	reads.fq.gz
-1	4
gene	gene_id	feature_A	1
gene	gene_id	feature_B	2
gene	gene_id	feature_C	2
gene	gene_id	feature_D	1
-1	4
gene	gene_name	featA	1
gene	gene_name	featB	2
gene	gene_name	featC	2
gene	gene_name	featD	1

@luispedro luispedro added the bug label Apr 20, 2018

@luispedro luispedro closed this in b5d3127 Apr 11, 2019

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
2 participants
You can’t perform that action at this time.