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Strange error when QC some samples #91
Some more information:
submitting it to slurm with the script (
The output that I get using
I have writing permission. I can reproduce the error also with just one lane:
and also if I rename the samples to:
The error says
but when I check
It seems indeed a problem when moving the files to the final destination.
Okay, I figured this out. It's a mix of (1) what I think is a bug in your code (2) NGLess does not correctly check if the output directory exists and (3) outputs a horrible error message, (4) partially because of another bug in the haskell posix library (haskell/unix#60)
You were doing:
You load the data from
If this directory does not exist, you get the stupid behaviour you saw.
I am re-classifying this bug as "better-error-message"