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Copy file name to clipboardExpand all lines: README.md
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@@ -241,7 +241,7 @@ We can next plot the species tree using:
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The `T` (true) at the end will lead to arrows being plotted as forward in time arrows (i.e. migration was from species to species).
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If it's `F` (false), then it will plot arrows for backwards in time gene flow.
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The value 0.1 denotes the posterior threshold to plot an arrow (i.e. the posterior support for gene flow has to be above that value to be plotted).
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The second number is for a Bayes values threshold for Bayes values calculated using the third number as a prior probability for gene flow.
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The second number is for a Bayes Factor values threshold for Bayes Factor values calculated using the third number as a prior probability for gene flow.
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At the end, things should look approximately like this:
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