I have noticed fmriprep leaves the work folders in the system after finishing data processing. I have included commands to delete the work folders in my scripts, but considering that each work folders is 80-100Gb, it might be useful to add a flag to the fmriprep call to tell to delete the work folder automatically if the run was successful.
I can imagine this can be a problem for others, too, 100 subjects would take 10Tb of space if work folders are not deleted.
If there is already a solution/flag for this, sorry I have missed it.
Thank you.