From 4f9e92d29bda0bdb1003d7d9b99e9da0d2064704 Mon Sep 17 00:00:00 2001 From: oesteban Date: Thu, 18 May 2017 11:00:36 -0700 Subject: [PATCH 1/4] update requirements --- requirements.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/requirements.txt b/requirements.txt index a8ad1c1ba..0d04b0ba2 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,3 +1,3 @@ numpy>=1.12.0 git+https://github.com/nipy/nipype.git@f92a333b0d191773aa9cefd87fba869b87ab1414#egg=nipype -git+https://github.com/poldracklab/niworkflows.git@178cdafd547cbad4656b06ff09f959d488fbcbe4#egg=niworkflows +git+https://github.com/oesteban/niworkflows.git@eed0ea8731225511c0d310016debe9740884ae87#egg=niworkflows From 573398aca92fd8d2229702a4b251d18615460fc7 Mon Sep 17 00:00:00 2001 From: oesteban Date: Fri, 19 May 2017 12:34:19 -0700 Subject: [PATCH 2/4] set unifize=True --- mriqc/workflows/anatomical.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/mriqc/workflows/anatomical.py b/mriqc/workflows/anatomical.py index ea18471fc..923d6fce9 100644 --- a/mriqc/workflows/anatomical.py +++ b/mriqc/workflows/anatomical.py @@ -95,7 +95,7 @@ def anat_qc_workflow(dataset, settings, mod='T1w', name='anatMRIQC'): # 1. Reorient anatomical image to_ras = pe.Node(ConformImage(), name='conform') # 2. Skull-stripping (afni) - asw = skullstrip_wf() + asw = skullstrip_wf(unifize=True) # 3. Head mask hmsk = headmsk_wf() # 4. Spatial Normalization, using ANTs From b303e5c3a2f0997f884d7544812f35931b0a5e7e Mon Sep 17 00:00:00 2001 From: oesteban Date: Fri, 19 May 2017 17:33:10 -0700 Subject: [PATCH 3/4] do not use 3dUnifize --- mriqc/data/testdata/T1w.csv | 8 +- mriqc/interfaces/__init__.py | 2 +- mriqc/interfaces/anatomical.py | 60 +++++++++++-- mriqc/workflows/anatomical.py | 17 +++- requirements.txt | 2 +- tests/nii_T1w.txt | 157 +++++++++++++++++---------------- 6 files changed, 153 insertions(+), 93 deletions(-) diff --git a/mriqc/data/testdata/T1w.csv b/mriqc/data/testdata/T1w.csv index 689166f7b..2ee3cf62d 100644 --- a/mriqc/data/testdata/T1w.csv +++ b/mriqc/data/testdata/T1w.csv @@ -1,5 +1,5 @@ subject_id,cjv,cnr,efc,fber,fwhm_avg,fwhm_x,fwhm_y,fwhm_z,icvs_csf,icvs_gm,icvs_wm,inu_med,inu_range,qi_1,qi_2,rpve_csf,rpve_gm,rpve_wm,size_x,size_y,size_z,snr_csf,snr_gm,snr_total,snr_wm,snrd_csf,snrd_gm,snrd_total,snrd_wm,spacing_x,spacing_y,spacing_z,summary_bg_k,summary_bg_mean,summary_bg_p05,summary_bg_p95,summary_bg_stdv,summary_csf_k,summary_csf_mean,summary_csf_p05,summary_csf_p95,summary_csf_stdv,summary_gm_k,summary_gm_mean,summary_gm_p05,summary_gm_p95,summary_gm_stdv,summary_wm_k,summary_wm_mean,summary_wm_p05,summary_wm_p95,summary_wm_stdv,tpm_overlap_csf,tpm_overlap_gm,tpm_overlap_wm,wm2max -50137,0.565541684627533,1.0896437168121338,0.5319478135739509,219.10040283203125,3.97176,3.84915,4.30615,3.75998,0.2133978898855149,0.42686969810291575,0.35973241201156936,1.2152518033981323,0.45196907520294216,0.0,0.0015283866670782967,1.8645534021456245,1.9502849035534549,4.081417886788103,208,256,176,2.238815903981205,8.85070887924841,8.49633122221015,14.399468883400834,-1.0,-1.0,-1.0,-1.0,1.0,1.0,1.0,8.661054560018206,6.259814262390137,0.0,25.0,9.651860237121582,79.4594446296568,115.38166046142578,62.0,155.0,50.372474670410156,-0.46137475899747793,186.69911193847656,141.0,241.0,30.38212776184082,-0.40774409895001495,286.1103210449219,226.0,348.0,37.21195983886719,0.23382176458835602,0.514546811580658,0.5550331473350525,0.46006389776357826 -50152,0.5132028460502625,7.670464038848877,0.5214256578867659,202.1680450439453,3.4652784600909166,3.4267453802727488,3.65075,3.31834,0.16868135537307122,0.4885912301853383,0.3427274144415905,0.9292771816253662,0.3650368571281435,0.0,0.00640636674822209,1.765594289508632,2.3376199943253915,3.2912439466622065,160,239,200,3.5005435256874744,11.199840721944808,9.55084757500443,13.95215847738101,6.01660690446043,9.782957096938803,9.95264372741453,14.058367180844355,1.100000023841858,1.0,1.0,-1.0660642845540835,9.22282600402832,0.0,22.0,8.128961563110352,6.375584361190979,125.77245330810547,63.0,176.0,36.377098083496094,-0.6639384790376175,205.5374755859375,155.0,260.0,31.786623001098633,-0.35423826045711815,303.6893005371094,245.0,362.0,35.58559036254883,0.2079515904188156,0.5339961051940918,0.5221186280250549,0.591796875 -50785,0.7246322631835938,1.0023349523544312,0.3827107285546845,633.4791259765625,3.352164997200236,3.199,3.611644991600707,3.24585,0.20414998904652737,0.4384699518998948,0.35738005905357784,1.3165277242660522,0.1928600192070007,0.0,0.001401353360826457,1.756238682956272,1.93681274168809,2.699256129878401,256,180,256,3.314242754568008,7.7660285522071275,6.436361165127116,8.228812188606211,-1.0,-1.0,-1.0,-1.0,1.0,0.9999875426292419,1.0,471.69220114417385,0.5898849368095398,0.0,0.0,6.1377482414245605,3.9118672776407806,267.7598876953125,122.0,362.0,75.62522888183594,-0.7159644876334115,455.7116394042969,350.0,569.0,67.79915618896484,0.6003910857172552,709.3773803710938,569.0,880.0,97.70134735107422,0.20489205420017242,0.49960723519325256,0.5370237827301025,0.3732545649838883 -51187,0.6709977984428406,1.0940006971359253,0.3998666109215282,319.3792419433594,3.7801451255770178,4.346218421569919,3.1878984798915484,3.8063184752695856,0.18837399720708245,0.4525009740272195,0.359125028765698,1.7580251693725586,0.6602846145629884,0.0,0.00011083487655092947,1.4883090436864055,1.9651207274425997,3.038739081909938,256,132,256,2.5933751628444095,6.454748681549273,5.754041768760325,8.21400146188729,-1.0,-1.0,-1.0,-1.0,0.8593999743461609,1.5000007152557373,0.8593999743461609,6.751267645328532,86.73345947265625,0.0,361.0,134.44102478027344,126.45728715460484,2106.998046875,1028.0,2964.0,847.3251953125,0.04866928122287417,3658.23828125,2545.0,5084.0,777.8174438476562,-0.1645218582127237,6219.9453125,4467.0,8255.0,1181.12939453125,0.17126674950122833,0.48971468210220337,0.5144017338752747,0.3484224965706447 +50137,0.5656890869140625,1.0901191234588623,0.5319476148590403,205.7071990966797,3.9645233333333336,3.84542,4.29503,3.75312,0.21243142133771423,0.4273362137460908,0.3602323649161949,1.2155532836914062,0.4519944071769715,0.0,0.001134703230314223,1.8551248357424441,1.9534778151662253,4.0794477489414405,208,256,176,2.237088021261269,8.848283252824702,8.495728941456358,14.401815550283107,-1.0,-1.0,-1.0,-1.0,1.0,1.0,1.0,12.665087988036802,24.683677673339844,0.0,98.35079727172854,38.78409194946289,69.87878434289968,434.67620849609375,226.8680137634277,553.1063934326172,171.52459716796875,-0.74198300068575,679.6033325195312,556.0519226074218,817.826416015625,81.7818374633789,0.1870625167366473,970.226318359375,837.7624999999999,1088.4026611328125,77.8687515258789,0.2344314157962799,0.5149914026260376,0.5560255646705627,0.424333506968136 +50152,0.5146932601928711,7.765101432800293,0.5214255687702767,191.7663116455078,3.4654139146455,3.425481743936501,3.65108,3.31968,0.1697710956876235,0.48811702302118115,0.34211188129119535,0.929002046585083,0.3648045063018799,0.0,0.006413132248720142,1.7964221799349471,2.3493613210712243,3.270955466540999,160,239,200,3.574245176696497,11.196603839231775,9.552529370511195,13.886739095605312,5.9787766146135395,9.777874849262632,9.938709762667202,14.059477824125436,1.100000023841858,1.0,1.0,-0.9192096934952736,34.094764709472656,0.0,83.0862045288086,30.4027099609375,4.137487309038303,446.6484069824219,231.15780334472657,589.1029541015624,121.4632568359375,-0.2685047689794895,692.888427734375,587.7748443603516,813.0500396728517,68.11819458007812,-0.35617010470141297,962.8225708007812,818.895068359375,1074.1874877929688,78.38432312011719,0.20907104015350342,0.5362102389335632,0.5242805480957031,0.558729172012127 +50785,0.7243485450744629,1.0026044845581055,0.38271069363172155,619.2051391601562,3.3421949682157255,3.17741,3.604664904647176,3.24451,0.20377081638106084,0.4386936839618546,0.35753549965708453,1.3165210485458374,0.19282884597778316,0.0,0.0014329981970159678,1.7541009139811035,1.9393245942347141,2.701396567440305,256,180,256,3.3083984930615817,7.760798504724598,6.432708615277577,8.228928848046552,-1.0,-1.0,-1.0,-1.0,1.0,0.9999875426292419,1.0,433.27592270847833,0.8440870642662048,0.0,0.0,8.676198959350586,5.327923193795161,369.2961120605469,169.98866729736332,484.0197067260742,102.6768798828125,-0.9015700696968723,624.5423583984375,490.16697387695314,766.8406372070312,88.35787963867188,1.2857461546084066,955.811279296875,791.1221160888672,1161.7159912109373,119.12786865234375,0.20497621595859528,0.499496728181839,0.5363927483558655,0.4206343830640121 +51187,0.6705390810966492,1.093096375465393,0.39986644462915005,195.72158813476562,3.7754925498478755,4.342099268549588,3.181131816451478,3.8032465645425595,0.18692240457796702,0.45369312733917144,0.35938446808286156,1.7587672472000122,0.6610252022743222,0.0,0.0001110166422666669,1.4729657846827817,1.9788936819604213,3.0368867777604733,256,132,256,2.554520342401934,6.453501228461021,5.74593128338691,8.229772279297775,-1.0,-1.0,-1.0,-1.0,0.8593999743461609,1.5000007152557373,0.8593999743461609,6.1875527149565155,15.721147537231445,0.0,64.94570884704589,24.072799682617188,174.69223549252098,352.6259765625,171.46087341308595,469.86808471679683,133.48622131347656,-0.7236107665921416,594.5523071289062,445.5072570800781,750.8271850585936,95.30786895751953,-0.03955240383212999,941.4046630859375,764.8135498046876,1118.5591125488281,113.35331726074219,0.17363062500953674,0.4903557300567627,0.516476035118103,0.32695835903383885 diff --git a/mriqc/interfaces/__init__.py b/mriqc/interfaces/__init__.py index 0693f1d04..f8b92fed5 100644 --- a/mriqc/interfaces/__init__.py +++ b/mriqc/interfaces/__init__.py @@ -8,7 +8,7 @@ from __future__ import absolute_import from __future__ import unicode_literals -from mriqc.interfaces.anatomical import StructuralQC, ArtifactMask, ComputeQI2 +from mriqc.interfaces.anatomical import StructuralQC, ArtifactMask, ComputeQI2, Harmonize from mriqc.interfaces.functional import FunctionalQC, Spikes from mriqc.interfaces.bids import ReadSidecarJSON, IQMFileSink from mriqc.interfaces.viz import PlotMosaic, PlotContours, PlotSpikes diff --git a/mriqc/interfaces/anatomical.py b/mriqc/interfaces/anatomical.py index 639c5154a..007a3450f 100644 --- a/mriqc/interfaces/anatomical.py +++ b/mriqc/interfaces/anatomical.py @@ -7,7 +7,7 @@ # @Date: 2016-01-05 11:29:40 # @Email: code@oscaresteban.es # @Last modified by: oesteban -# @Last Modified time: 2017-05-17 16:54:26 +# @Last Modified time: 2017-05-19 16:36:34 """ Nipype interfaces to support anatomical workflow """ from __future__ import print_function, division, absolute_import, unicode_literals import os.path as op @@ -17,6 +17,7 @@ from builtins import zip from nipype import logging +from nipype.utils.filemanip import fname_presuffix from nipype.interfaces.base import (traits, TraitedSpec, File, InputMultiPath, BaseInterfaceInputSpec) @@ -122,7 +123,7 @@ def _run_interface(self, runtime): # pylint: disable=R0914 self._results['efc'] = efc(inudata) # M2WM - self._results['wm2max'] = wm2max(imdata, segdata) + self._results['wm2max'] = wm2max(inudata, segdata) # Artifacts self._results['qi_1'] = art_qi1(airdata, artdata) @@ -147,18 +148,18 @@ def _run_interface(self, runtime): # pylint: disable=R0914 self._results['rpve'] = rpve(pvmdata, segdata) # Summary stats - self._results['summary'] = summary_stats(imdata, pvmdata, airdata) + self._results['summary'] = summary_stats(inudata, pvmdata, airdata) # Image specs - self._results['size'] = {'x': int(imdata.shape[0]), - 'y': int(imdata.shape[1]), - 'z': int(imdata.shape[2])} + self._results['size'] = {'x': int(inudata.shape[0]), + 'y': int(inudata.shape[1]), + 'z': int(inudata.shape[2])} self._results['spacing'] = { i: float(v) for i, v in zip( ['x', 'y', 'z'], imnii.get_header().get_zooms()[:3])} try: - self._results['size']['t'] = int(imdata.shape[3]) + self._results['size']['t'] = int(inudata.shape[3]) except IndexError: pass @@ -278,6 +279,51 @@ def _run_interface(self, runtime): return runtime +class HarmonizeInputSpec(BaseInterfaceInputSpec): + in_file = File(exists=True, mandatory=True, desc='input data (after bias correction)') + wm_mask = File(exists=True, mandatory=True, desc='white-matter mask') + erodemsk = traits.Bool(True, usedefault=True, desc='erode mask') + + +class HarmonizeOutputSpec(TraitedSpec): + out_file = File(exists=True, desc='input data (after intensity harmonization)') + + +class Harmonize(SimpleInterface): + """ + Computes the artifact mask using the method described in [Mortamet2009]_. + """ + input_spec = HarmonizeInputSpec + output_spec = HarmonizeOutputSpec + + def _run_interface(self, runtime): + + in_file = nb.load(self.inputs.in_file) + wm_mask = nb.load(self.inputs.wm_mask).get_data() + wm_mask[wm_mask < 0.9] = 0 + wm_mask[wm_mask > 0] = 1 + wm_mask = wm_mask.astype(np.uint8) + + if self.inputs.erodemsk: + # Create a structural element to be used in an opening operation. + struc = nd.generate_binary_structure(3, 2) + # Perform an opening operation on the background data. + wm_mask = nd.binary_opening(wm_mask, structure=struc).astype(np.uint8) + + data = in_file.get_data() + data *= 1000.0 / np.median(data[wm_mask > 0]) + + out_file = fname_presuffix(self.inputs.in_file, + suffix='_harmonized', newpath='.') + in_file.__class__(data, in_file.affine, in_file.header).to_filename( + out_file) + + self._results['out_file'] = out_file + + return runtime + + + def artifact_mask(imdata, airdata, distance, zscore=10.): """Computes a mask of artifacts found in the air region""" from statsmodels.robust.scale import mad diff --git a/mriqc/workflows/anatomical.py b/mriqc/workflows/anatomical.py index 21cf54452..00eec4263 100644 --- a/mriqc/workflows/anatomical.py +++ b/mriqc/workflows/anatomical.py @@ -95,7 +95,7 @@ def anat_qc_workflow(dataset, settings, mod='T1w', name='anatMRIQC'): # 1. Reorient anatomical image to_ras = pe.Node(ConformImage(), name='conform') # 2. Skull-stripping (afni) - asw = skullstrip_wf(n4_nthreads=settings.get('ants_nthreads', 1), unifize=True) + asw = skullstrip_wf(n4_nthreads=settings.get('ants_nthreads', 1), unifize=False) # 3. Head mask hmsk = headmsk_wf() # 4. Spatial Normalization, using ANTs @@ -237,6 +237,7 @@ def compute_iqms(settings, modality='T1w', name='ComputeIQMs'): """ from mriqc.workflows.utils import _tofloat + from mriqc.interfaces.anatomical import Harmonize workflow = pe.Workflow(name=name) inputnode = pe.Node(niu.IdentityInterface(fields=[ @@ -253,6 +254,9 @@ def compute_iqms(settings, modality='T1w', name='ComputeIQMs'): fwhm = pe.Node(afni.FWHMx(combine=True, detrend=True), name='smoothness') # fwhm.inputs.acf = True # add when AFNI >= 16 + # Harmonize + homog = pe.Node(Harmonize(), name='harmonize') + # Mortamet's QI2 getqi2 = pe.Node(ComputeQI2(erodemsk=settings.get('testing', False)), name='ComputeQI2') @@ -272,6 +276,9 @@ def compute_iqms(settings, modality='T1w', name='ComputeIQMs'): name='datasink') datasink.inputs.modality = modality + def _getwm(inlist): + return inlist[-1] + workflow.connect([ (inputnode, datasink, [('subject_id', 'subject_id'), ('session_id', 'session_id'), @@ -281,8 +288,9 @@ def compute_iqms(settings, modality='T1w', name='ComputeIQMs'): ('metadata', 'metadata')]), (inputnode, getqi2, [('orig', 'in_file'), ('airmask', 'air_msk')]), - (inputnode, measures, [('inu_corrected', 'in_noinu'), - ('in_inu', 'in_bias'), + (inputnode, homog, [('inu_corrected', 'in_file'), + (('pvms', _getwm), 'wm_mask')]), + (inputnode, measures, [('in_inu', 'in_bias'), ('orig', 'in_file'), ('airmask', 'air_msk'), ('headmask', 'head_msk'), @@ -293,12 +301,13 @@ def compute_iqms(settings, modality='T1w', name='ComputeIQMs'): ('brainmask', 'mask')]), (inputnode, invt, [('orig', 'reference_image'), ('inverse_composite_transform', 'transforms')]), + (homog, measures, [('out_file', 'in_noinu')]), (invt, measures, [('output_image', 'mni_tpms')]), (fwhm, measures, [(('fwhm', _tofloat), 'in_fwhm')]), (measures, datasink, [('out_qc', 'root')]), (getqi2, datasink, [('qi2', 'qi_2')]), (getqi2, outputnode, [('out_file', 'out_noisefit')]), - (datasink, outputnode, [('out_file', 'out_file')]) + (datasink, outputnode, [('out_file', 'out_file')]), ]) return workflow diff --git a/requirements.txt b/requirements.txt index a06f8fc2e..4bb03f3d7 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,3 +1,3 @@ numpy>=1.12.0 git+https://github.com/nipy/nipype.git@f92a333b0d191773aa9cefd87fba869b87ab1414#egg=nipype -git+https://github.com/poldracklab/niworkflows.git@8b0838a6717904c9c171486d5fddb6568202ef5a#egg=niworkflows +git+https://github.com/poldracklab/niworkflows.git@57f9609790628bed0285823943403472e95ac70f#egg=niworkflows diff --git a/tests/nii_T1w.txt b/tests/nii_T1w.txt index bf81e01c8..110324af5 100644 --- a/tests/nii_T1w.txt +++ b/tests/nii_T1w.txt @@ -1,85 +1,90 @@ -66b1134ac071c6716e490d3804554fa04778bbf3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/binarize/sub-50137_T1w_conformed_calc_thresh.nii.gz -15ccdd4645a6b8e0825312f2d3d3ebc8df8ed2e9 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_bias.nii.gz -3a3347b831762f5415bcc3d84a328facc5b56234 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_corrected.nii.gz -a3495421d86e2427599522bf63288e61bd1475e1 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/skullstrip/sub-50137_T1w_conformed_corrected_skullstrip.nii.gz -4b74d5cb8df64a8e84f4afc5844843c065aaf353 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/sstrip_orig_vol/sub-50137_T1w_conformed_calc.nii.gz -3d267af7824d80aa8e3d9b45eee4f556e731d64a /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/binarize/sub-50152_T1w_conformed_calc_thresh.nii.gz -7a80c649e8ca254a9768696a88a0faf41984c226 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_bias.nii.gz -9913213d42a58f86e9140eef3f2656dbc55c54fa /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_corrected.nii.gz -33ee7cfedc5542b32ba31d9d5b59e4fb3b02c15d /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/skullstrip/sub-50152_T1w_conformed_corrected_skullstrip.nii.gz -ef6fcdc8a1d66a98e1f95e4c87846368e5aebfa5 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/sstrip_orig_vol/sub-50152_T1w_conformed_calc.nii.gz -1e61cea44924558f34113d193a729b2795b4b6be /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/binarize/sub-50785_T1w_conformed_calc_thresh.nii.gz -2bb2f18bd079b27d53f5f57e38a29a223b1995f8 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_bias.nii.gz -409e6cac86d18b31a1e442fc7040f732ff4f7f37 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_corrected.nii.gz -46550dda2bae5bbf111b18a90dbdecc3e264fc77 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/skullstrip/sub-50785_T1w_conformed_corrected_skullstrip.nii.gz -360afdfdb7ffa81247f66a512a63f586fa5bbb08 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/sstrip_orig_vol/sub-50785_T1w_conformed_calc.nii.gz -553bcfd596c1c3e039d7966de6de712fd4fb81d7 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/binarize/sub-51187_T1w_conformed_calc_thresh.nii.gz -59a51baeb2e08e682eac1381e839ba5c8ca55814 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_bias.nii.gz -b015180ba2be5c4a92ee85dedf6ccaf2212c1289 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_corrected.nii.gz -0e645d84db56c9eeeb6a8677d16b3f9e0300c692 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/skullstrip/sub-51187_T1w_conformed_corrected_skullstrip.nii.gz -d6b81e9fd18782f0923a80b6a90fc4c725b32eb3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/sstrip_orig_vol/sub-51187_T1w_conformed_calc.nii.gz +debdbf1e4987780a2ef7f53fee0888fa9f34b768 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/binarize/sub-50137_T1w_conformed_calc_thresh.nii.gz +ffaa31d607f69a6ede9c89335ea2ea29e4ead29b /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_bias.nii.gz +13cc4231ae7febc787225e138027c27a4a394ba3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_corrected.nii.gz +0ac12a8e3637f93c888c26004ac73cf03022b05d /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/skullstrip/sub-50137_T1w_conformed_corrected_skullstrip.nii.gz +a2d91bd8dfcffc27786ad28e2edfda8f2df40f26 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/sstrip_orig_vol/sub-50137_T1w_conformed_calc.nii.gz +7bee7ef1ceb42f79794405292623610c81e6b215 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/binarize/sub-50152_T1w_conformed_calc_thresh.nii.gz +8beaab5b17d0a8a2c06757c4c2bf5e50c2c9372f /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_bias.nii.gz +23dbb0a8ed4ca82b5cb21157c5158da2336cb185 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_corrected.nii.gz +992b763f6ed8c7d8e585d777956db564a838d7dd /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/skullstrip/sub-50152_T1w_conformed_corrected_skullstrip.nii.gz +4d08e315da76a8e31daed832793b49659c3be557 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/sstrip_orig_vol/sub-50152_T1w_conformed_calc.nii.gz +6290999ab5dbb42af2f48f90dbaca890aec8c67a /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/binarize/sub-50785_T1w_conformed_calc_thresh.nii.gz +435fc08347b6bfd560270328a7581943cacad1f8 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_bias.nii.gz +0b174080aa03dc186defd543a55c5c7c5b2b545b /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_corrected.nii.gz +44f88a4467d20b8e6b7520085f7808f06f04d699 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/skullstrip/sub-50785_T1w_conformed_corrected_skullstrip.nii.gz +6ab77fd0bd3b5f2165fb0c8ed66013891194bbe9 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/sstrip_orig_vol/sub-50785_T1w_conformed_calc.nii.gz +2558f33c08f35c623d2a1be795bc2b418de8e373 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/binarize/sub-51187_T1w_conformed_calc_thresh.nii.gz +a97f362dee72cb164f98f1b8d8605526df61fac5 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_bias.nii.gz +2ff7d6c3048e6138532f40155fc0d9d3d10f7c1d /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_corrected.nii.gz +0d1f35263b25506ab595bf8107ab88bb2971bfbf /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/skullstrip/sub-51187_T1w_conformed_corrected_skullstrip.nii.gz +9ec4d6aa82716f5d660abc71c81b094f36b38e8a /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/sstrip_orig_vol/sub-51187_T1w_conformed_calc.nii.gz +ae0d13860d4d9f71a777125365376b787dd197b5 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/unifize_pre_skullstrip/sub-51187_T1w_conformed_corrected_generated.nii.gz 46dbbcae9f4ec6fae7f9601b7ffea5f3527bdd1e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/ArtifactMask/sub-50137_T1w_conformed_artifacts.nii.gz -29c47e25bad037be24401a9f8da22577e8a007cf /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/ArtifactMask/sub-50137_T1w_conformed_noart-air.nii.gz -68dfb715f97c9839faeacd77525b058a87b8f2c6 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -17c76894ad331c613ba7087cf222768591a9a794 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +b5e52bcf33ff946d5ae2188e13204b74e62891f9 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/ArtifactMask/sub-50137_T1w_conformed_noart-air.nii.gz +0950af1d8dad6c7990714004be9963396f96592a /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +2d06dcdf4611b512ce99f8714101d3d49b259309 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz b512dc02495729f9ba0b13737f82e358a75072e4 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/ArtifactMask/sub-50152_T1w_conformed_artifacts.nii.gz -02910370c124790170078357288c8f16b6d1d7ec /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/ArtifactMask/sub-50152_T1w_conformed_noart-air.nii.gz -41ec7f1437b6b1c8b0af896b3044a1071bb640a2 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -8f6c9e7ad422debb2c59a3c28aff403809dfa4f2 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +d4c75adfcfcdc1898997d034935355c659079711 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/ArtifactMask/sub-50152_T1w_conformed_noart-air.nii.gz +34fe60254d16cb7563238d75ce948065cee397fa /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +0ef4172b66bcffcd01016efac3fa315caa65202c /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz aaafd84713bf0e7b43e45845c3c93228de07e735 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/ArtifactMask/sub-50785_T1w_conformed_artifacts.nii.gz -175318586fb55d263f2da95ee5ed9c6ae52cc74b /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/ArtifactMask/sub-50785_T1w_conformed_noart-air.nii.gz -0efe1ec51bf514fcdd5358ef1e9ad844ab860277 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -0f4af4443af9b0f66d65aa38a68a3563e4715f9e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +d9b38c6933d451b23a72d1b17bbca803c2ecc5aa /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/ArtifactMask/sub-50785_T1w_conformed_noart-air.nii.gz +384e80a9c8c8851aa12726d3f9ad349aca0367ef /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +29226039d035708e96e81fb1cf9686380efc3f4e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz 592e57ccb78ec6efe24709d15ccb6935df53c1c4 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/ArtifactMask/sub-51187_T1w_conformed_artifacts.nii.gz -5feb2b8a1ff88237d5631f5e66a80304f21778d3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/ArtifactMask/sub-51187_T1w_conformed_noart-air.nii.gz -c75931ec5f1e1f5104bd25b90507be24e484aba0 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -083245f8226f08929d764e5d599665e84ee43d1f /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz -29cb0e176238cfdc8a8d0762cfc17792299d1d4e /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -52923c01b6af7557869ba5080c9f3915fca971a6 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -13b33085ef4661932f79575c704fad84dc3feb27 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -6e8c56697a9b42d687f94389e9032234a12815fd /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -896a69f791936edc6b3a8df7b178e685a7fb4ce3 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -b35d258e85fb743a68c22d15781963901b53d260 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -9c64016b484ba0010d339a5ffa3fb02c56ce2979 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -3558eb0db57f86fefb1d32ada58b7577c7862edb /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -7c199ce85f066e71ad4b7155d7447eee208499e7 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -ecd3eec83a91571c53ea8e5e7cd798dd7c53b5fc /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -4747a4ba51f8722250422e246c09b9548215a162 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -1f11d6ab154435bd2455363597ab99cbfa1735fa /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -4200aa64620eebbf0ff4edb83c651060b902d01a /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/fsl_bet/sub-50137_T1w_conformed_corrected_brain_outskin_mask.nii.gz -f90b3629d96412cace1fd9288ac61efdb596a7f2 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/fsl_bet/sub-50152_T1w_conformed_corrected_brain_outskin_mask.nii.gz -bbebc568637e7f22d8fdb791aea32c3d22550220 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/fsl_bet/sub-50785_T1w_conformed_corrected_brain_outskin_mask.nii.gz -00b0065df1a6f94e509c3a21e971c0be4e39247e /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/fsl_bet/sub-51187_T1w_conformed_corrected_brain_outskin_mask.nii.gz +f4f805c2defaf521534844edda0d44236f205d5e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/ArtifactMask/sub-51187_T1w_conformed_noart-air.nii.gz +89323e00f9f2afe3f30a07429abeb6567871a010 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +793900301d19b1a2df1b23ef21586f99f3ce77ba /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +7b4c12e4a9001162df4a8612fbe28da587e88605 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/harmonize/sub-50137_T1w_conformed_corrected_harmonized.nii.gz +8e71e2f7a15007a211fbdffd588c8ba5d3bf1fd0 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +b2f30a02b9f39d4a138f66ca386a05e49475f261 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +541990de22b7c411eebf4cf6072e7291bd574e4c /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +9ccc567f59d6093d51a6b927699d4138cd2741a1 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/harmonize/sub-50152_T1w_conformed_corrected_harmonized.nii.gz +9d54dd5c92b4a8d506c3f3b0c5d437926273e285 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +24f4b764f7bce8c91003558eef9ec5c48ef66366 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +007904ab37c0c09a4e21deb42ada663a23489a74 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +76b8ff9405251a923bacbc377109f01626f27fbd /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/harmonize/sub-50785_T1w_conformed_corrected_harmonized.nii.gz +5fde01817809e98250365080a3298fce061d7c9b /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +980d211a9ee683483ddc1176356b7120ecf34c04 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +e4a1e57459bf8fad64c7c97bd878be1a684864ed /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +75bea54a77f76d84d0b5c5d867b4cd1a07005111 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/harmonize/sub-51187_T1w_conformed_corrected_harmonized.nii.gz +e67bcc9fa2170b0046039c6df9de1d8986348a40 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +5669bf77cdf52b3e487878c9ccd2a60b49fa42d8 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +11ec85ee8fcfd2dafe0f833898fea196e7344beb /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +b1cf117f4163186ba1d51018be979e844b10108b /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/fsl_bet/sub-50137_T1w_conformed_corrected_brain_outskin_mask.nii.gz +a3bcd35d7c854de90ca0fadcac24f5b5311c3a27 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/fsl_bet/sub-50152_T1w_conformed_corrected_brain_outskin_mask.nii.gz +db44fc61d739e7b0c67b99ab324e0bf10638b8b6 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/fsl_bet/sub-50785_T1w_conformed_corrected_brain_outskin_mask.nii.gz +3a7c5685f1897b134f86e81302ff20c3e710574b /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/fsl_bet/sub-51187_T1w_conformed_corrected_brain_outskin_mask.nii.gz e49e0da89180585da7c9c052d5dc85bd018517b8 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/conform/sub-50137_T1w_conformed.nii.gz -b78b889fe80f3dd487bdd60b796e0cd532604ccd /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -220233a3e437ddf5a2aefe266b3c2c5b060a50db /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -be98a50ad103cda0c7acf5d77d56d2b39326176d /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -77837282d4a560ab168f5121e94c48ba47e9e9e6 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_seg.nii.gz +d88700573bb0faa80cb72de2623a54706aeac5de /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +3547fe6793b9f117668882eb380c9758e3508950 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +4d19abce67954ce0e244ec3e2c6ae487590a5e4d /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +b2f6dc80b3b2cb3380ec6f3bb91ca78b47448aac /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_seg.nii.gz 1d63b8dbc88a816b149cde842af7c23c262ce22a /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/conform/sub-50152_T1w_conformed.nii.gz -df336d6da74d4609424298ba8818d501785e9c90 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -e2c68a5b07c33eee90b31cd6ee0143bc0fb22894 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -9ffa4f5bd8259ac4074c17244db85b949668b090 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -59c3815a079592766dbd3645ffb97257ac42e281 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_seg.nii.gz +4631c7db469cc1fcba5bbdc39953d6fdd0d9d796 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +bbdb719497270ce93dbf735400b48fc4e9c7125f /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +1929645ed7b755278a61b2847d47ad624dcefdc8 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +e68d8e82875158586d50861233338bb07fc7da1c /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_seg.nii.gz eeda1696304a13628b1e086071dec0b205313983 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/conform/sub-50785_T1w_conformed.nii.gz -2af16f3ada4e6d760219f03bf3390ac8153cce04 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -25fa1a32a1f4f8af94e86a7b172e1957a8e3ff3d /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -58a88d211961327efc74c389f4623e132c471c87 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -90bbdba73b3be1e2b3edc74fd8a1468ef697e619 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_seg.nii.gz +f16140c950c26b65721eb77e0a57e572a189f995 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +2255cc3815dcfca352a032e437eadfddc89f762c /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +a83a298134215a7664759e937a74cccff50b8133 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +e899893d3c481391bc03de8d003acea0f806bb5c /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_seg.nii.gz a97dcf6fcd68b7d878a95e1ee263ea69771963f7 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/conform/sub-51187_T1w_conformed.nii.gz -6bb09fb63613a684caf93ad168c28db64d7bacf4 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -28fb5661dd39271459f730dec1e6acf35b04fa68 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -bdeb37c079135f8b3f71c31e3c932106f220d710 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -96a2bf9e7163ca87815a661f3f9373b2e1d0b120 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_seg.nii.gz +71b194fecdcd24e8376055f57381e55d8e2e2145 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +2e04bcb4431e4211b82b9fdcf1b514e82be7b008 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +f3f4d17ca1aec6376be1b893c531377aa4ce42c8 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +01891773fe194a81ba0686d328e99993a8d27257 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_seg.nii.gz 37988cff898c18df99ae41209e9e5e840dc0fcc4 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/FixedApplyMask/2mm_T1_masked.nii.gz -ad147cd565cce63b23f547186e4b5cc425e76d1a /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resampled.nii.gz -1322c9be418cc31602c7b32c96f1eca231168247 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resmask.nii.gz -f379eec9c2e14334b3e47fa5b8c9ceaac21f12a2 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MovingApplyMask/sub-50137_T1w_conformed_corrected_resampled_masked.nii.gz -25cb53a04b545e28fa156462748ddc2084c277b7 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resampled.nii.gz -aa5f3b5b749de00bab13ea6f6e1efbe45b5e524b /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resmask.nii.gz -2e733dc289ef7532ab30ffe24c25df5d078842f9 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MovingApplyMask/sub-50152_T1w_conformed_corrected_resampled_masked.nii.gz -f6c38b8796001ff3b72e10cf6e2ebc142a8ef62c /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resampled.nii.gz -1381cbf3bc09fb7ab4e710a2e46ac811c53aff72 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resmask.nii.gz -df1bc1ae9a6e2c3bc821c8fb51d989ebeb76c1c1 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MovingApplyMask/sub-50785_T1w_conformed_corrected_resampled_masked.nii.gz -6b98feff7713e87f57c3095efd930b00251f9cc9 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resampled.nii.gz -2b5d6f95c442a61cc9541c0af4a295d95bc52164 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resmask.nii.gz -28a965ac1324a2a851aa6a13e685aa98901a8071 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MovingApplyMask/sub-51187_T1w_conformed_corrected_resampled_masked.nii.gz +6c94f23397b0705af159b39e4cee8822b949a63c /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resampled.nii.gz +15b1b174a8170338f53be99ec70d945037d77213 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resmask.nii.gz +2a5b97a5fa70e86eb7436f9d9b7b5bd94b0c32ce /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MovingApplyMask/sub-50137_T1w_conformed_corrected_resampled_masked.nii.gz +a5610502972773b571119e760c8027380958d02f /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resampled.nii.gz +dd458ad212b773f1c855fe9d716a02c29fdd8ead /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resmask.nii.gz +4c085d9e8d3f7ed81a3ee0e678c6ac4d64ec68d2 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MovingApplyMask/sub-50152_T1w_conformed_corrected_resampled_masked.nii.gz +583bfc507591ca8d33131e29c4ab4edc724cb35c /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resampled.nii.gz +46b381e11b63dafdf9a4fe9bf62e2e9214d8db3b /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resmask.nii.gz +ed908136165138aa5019534cd54c3e97de86345f /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MovingApplyMask/sub-50785_T1w_conformed_corrected_resampled_masked.nii.gz +2715eab8da8f7a9eea3382b92cb1f22cb6ea50f1 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resampled.nii.gz +b768d7f41ec719ca358f76b490c3802e12e76540 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resmask.nii.gz +dffa0a3edf06c7027731f18cda0d0dcff86f8e6e /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MovingApplyMask/sub-51187_T1w_conformed_corrected_resampled_masked.nii.gz From 56ef5c3b6408b6b518662a77357cc7b10ce75dbd Mon Sep 17 00:00:00 2001 From: Oscar Esteban Date: Sun, 21 May 2017 16:31:56 -0700 Subject: [PATCH 4/4] update artifacts --- mriqc/data/testdata/T1w.csv | 8 +- tests/nii_T1w.txt | 161 ++++++++++++++++++------------------ 2 files changed, 84 insertions(+), 85 deletions(-) diff --git a/mriqc/data/testdata/T1w.csv b/mriqc/data/testdata/T1w.csv index 2ee3cf62d..99f8875e3 100644 --- a/mriqc/data/testdata/T1w.csv +++ b/mriqc/data/testdata/T1w.csv @@ -1,5 +1,5 @@ subject_id,cjv,cnr,efc,fber,fwhm_avg,fwhm_x,fwhm_y,fwhm_z,icvs_csf,icvs_gm,icvs_wm,inu_med,inu_range,qi_1,qi_2,rpve_csf,rpve_gm,rpve_wm,size_x,size_y,size_z,snr_csf,snr_gm,snr_total,snr_wm,snrd_csf,snrd_gm,snrd_total,snrd_wm,spacing_x,spacing_y,spacing_z,summary_bg_k,summary_bg_mean,summary_bg_p05,summary_bg_p95,summary_bg_stdv,summary_csf_k,summary_csf_mean,summary_csf_p05,summary_csf_p95,summary_csf_stdv,summary_gm_k,summary_gm_mean,summary_gm_p05,summary_gm_p95,summary_gm_stdv,summary_wm_k,summary_wm_mean,summary_wm_p05,summary_wm_p95,summary_wm_stdv,tpm_overlap_csf,tpm_overlap_gm,tpm_overlap_wm,wm2max -50137,0.5656890869140625,1.0901191234588623,0.5319476148590403,205.7071990966797,3.9645233333333336,3.84542,4.29503,3.75312,0.21243142133771423,0.4273362137460908,0.3602323649161949,1.2155532836914062,0.4519944071769715,0.0,0.001134703230314223,1.8551248357424441,1.9534778151662253,4.0794477489414405,208,256,176,2.237088021261269,8.848283252824702,8.495728941456358,14.401815550283107,-1.0,-1.0,-1.0,-1.0,1.0,1.0,1.0,12.665087988036802,24.683677673339844,0.0,98.35079727172854,38.78409194946289,69.87878434289968,434.67620849609375,226.8680137634277,553.1063934326172,171.52459716796875,-0.74198300068575,679.6033325195312,556.0519226074218,817.826416015625,81.7818374633789,0.1870625167366473,970.226318359375,837.7624999999999,1088.4026611328125,77.8687515258789,0.2344314157962799,0.5149914026260376,0.5560255646705627,0.424333506968136 -50152,0.5146932601928711,7.765101432800293,0.5214255687702767,191.7663116455078,3.4654139146455,3.425481743936501,3.65108,3.31968,0.1697710956876235,0.48811702302118115,0.34211188129119535,0.929002046585083,0.3648045063018799,0.0,0.006413132248720142,1.7964221799349471,2.3493613210712243,3.270955466540999,160,239,200,3.574245176696497,11.196603839231775,9.552529370511195,13.886739095605312,5.9787766146135395,9.777874849262632,9.938709762667202,14.059477824125436,1.100000023841858,1.0,1.0,-0.9192096934952736,34.094764709472656,0.0,83.0862045288086,30.4027099609375,4.137487309038303,446.6484069824219,231.15780334472657,589.1029541015624,121.4632568359375,-0.2685047689794895,692.888427734375,587.7748443603516,813.0500396728517,68.11819458007812,-0.35617010470141297,962.8225708007812,818.895068359375,1074.1874877929688,78.38432312011719,0.20907104015350342,0.5362102389335632,0.5242805480957031,0.558729172012127 -50785,0.7243485450744629,1.0026044845581055,0.38271069363172155,619.2051391601562,3.3421949682157255,3.17741,3.604664904647176,3.24451,0.20377081638106084,0.4386936839618546,0.35753549965708453,1.3165210485458374,0.19282884597778316,0.0,0.0014329981970159678,1.7541009139811035,1.9393245942347141,2.701396567440305,256,180,256,3.3083984930615817,7.760798504724598,6.432708615277577,8.228928848046552,-1.0,-1.0,-1.0,-1.0,1.0,0.9999875426292419,1.0,433.27592270847833,0.8440870642662048,0.0,0.0,8.676198959350586,5.327923193795161,369.2961120605469,169.98866729736332,484.0197067260742,102.6768798828125,-0.9015700696968723,624.5423583984375,490.16697387695314,766.8406372070312,88.35787963867188,1.2857461546084066,955.811279296875,791.1221160888672,1161.7159912109373,119.12786865234375,0.20497621595859528,0.499496728181839,0.5363927483558655,0.4206343830640121 -51187,0.6705390810966492,1.093096375465393,0.39986644462915005,195.72158813476562,3.7754925498478755,4.342099268549588,3.181131816451478,3.8032465645425595,0.18692240457796702,0.45369312733917144,0.35938446808286156,1.7587672472000122,0.6610252022743222,0.0,0.0001110166422666669,1.4729657846827817,1.9788936819604213,3.0368867777604733,256,132,256,2.554520342401934,6.453501228461021,5.74593128338691,8.229772279297775,-1.0,-1.0,-1.0,-1.0,0.8593999743461609,1.5000007152557373,0.8593999743461609,6.1875527149565155,15.721147537231445,0.0,64.94570884704589,24.072799682617188,174.69223549252098,352.6259765625,171.46087341308595,469.86808471679683,133.48622131347656,-0.7236107665921416,594.5523071289062,445.5072570800781,750.8271850585936,95.30786895751953,-0.03955240383212999,941.4046630859375,764.8135498046876,1118.5591125488281,113.35331726074219,0.17363062500953674,0.4903557300567627,0.516476035118103,0.32695835903383885 +50137,0.5655418038368225,1.0896434783935547,0.5319478533169331,219.10037231445312,3.97176,3.84915,4.30615,3.75998,0.2133978898855149,0.42686969810291575,0.35973241201156936,1.2152518033981323,0.45196907520294216,0.0,0.0015283866670782967,1.8645534021456245,1.9502849035534549,4.081417886788103,208,256,176,2.2388158155068605,8.850709180011705,8.496331340677312,14.399469026513371,-1.0,-1.0,-1.0,-1.0,1.0,1.0,1.0,10.025728583421737,24.52124786376953,0.0,97.97048645019531,38.064552307128906,71.05386307848232,434.1557922363281,227.0186668395996,552.9233245849609,170.4384002685547,-0.7402684607533514,679.5755004882812,556.08193359375,817.7769226074219,81.76122283935547,0.20637971830494006,970.2426147460938,837.7473327636719,1088.440051269531,77.92474365234375,0.23382176458835602,0.514546811580658,0.5550331473350525,0.424328142234561 +50152,0.5132023692131042,7.670464992523193,0.5214256578867659,202.168212890625,3.4652784600909166,3.4267453802727488,3.65075,3.31834,0.16868135537307122,0.4885912301853383,0.3427274144415905,0.9292771816253662,0.3650368571281435,0.0,0.00640636674822209,1.765594289508632,2.3376199943253915,3.2912439466622065,160,239,200,3.5005434525757626,11.199842877239929,9.550847751525884,13.95215692476196,6.016607014160164,9.7829576124543,9.952644185737848,14.058367930599081,1.100000023841858,1.0,1.0,-0.9237421578735807,34.02091598510742,0.0,82.92952270507811,30.356678009033203,4.409982278118531,449.5712585449219,234.48362884521484,590.3638305664061,120.90904998779297,-0.2643032225866122,693.541748046875,589.0667755126954,813.6859313964844,67.97644805908203,-0.3518840615356651,963.1089477539062,819.515267944336,1074.1770629882812,78.13372802734375,0.2079515904188156,0.5339961051940918,0.5221186280250549,0.5589662953179234 +50785,0.7246319651603699,1.0023353099822998,0.3827107984006105,633.478515625,3.352164997200236,3.199,3.611644991600707,3.24585,0.20414998904652737,0.4384699518998948,0.35738005905357784,1.3165277242660522,0.1928600192070007,0.0,0.001401353360826457,1.756238682956272,1.93681274168809,2.699256129878401,256,180,256,3.314242591580933,7.766029217071026,6.436361123922026,8.22881156311412,-1.0,-1.0,-1.0,-1.0,1.0,0.9999875426292419,1.0,423.96144804863866,0.8749421834945679,0.0,0.0,8.935418128967285,4.661123994028605,369.53472900390625,170.515380859375,484.2899856567383,102.40303039550781,-0.9001679042967661,624.609375,490.3605773925781,766.7576904296874,88.27824401855469,1.2987212736798055,955.612060546875,790.9808044433594,1161.2386169433594,119.04894256591797,0.20489205420017242,0.49960723519325256,0.5370237827301025,0.4205544698159526 +51187,0.6709979772567749,1.0940005779266357,0.3998666524946227,319.37921142578125,3.7801451255770178,4.346218421569919,3.1878984798915484,3.8063184752695856,0.18837399720708245,0.4525009740272195,0.359125028765698,1.7580251693725586,0.6602846145629884,0.0,0.00011083487655092947,1.4883090436864055,1.9651207274425997,3.038739081909938,256,132,256,2.593375073525042,6.454747956898468,5.754041599444694,8.214001767910572,-1.0,-1.0,-1.0,-1.0,0.8593999743461609,1.5000007152557373,0.8593999743461609,6.319455961407572,15.678553581237793,0.0,64.85365295410156,24.06060028076172,148.0743648674437,352.1060485839844,171.95945434570314,469.4457092285156,129.7559814453125,-0.7299780165339089,594.0829467773438,445.5936584472656,750.001708984375,95.08065795898438,-0.029851327734237376,941.2471313476562,764.3513000488281,1118.777001953125,113.59614562988281,0.17126674950122833,0.48971468210220337,0.5144017338752747,0.32675716205523264 diff --git a/tests/nii_T1w.txt b/tests/nii_T1w.txt index 110324af5..046f6c224 100644 --- a/tests/nii_T1w.txt +++ b/tests/nii_T1w.txt @@ -1,90 +1,89 @@ -debdbf1e4987780a2ef7f53fee0888fa9f34b768 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/binarize/sub-50137_T1w_conformed_calc_thresh.nii.gz -ffaa31d607f69a6ede9c89335ea2ea29e4ead29b /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_bias.nii.gz -13cc4231ae7febc787225e138027c27a4a394ba3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_corrected.nii.gz -0ac12a8e3637f93c888c26004ac73cf03022b05d /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/skullstrip/sub-50137_T1w_conformed_corrected_skullstrip.nii.gz -a2d91bd8dfcffc27786ad28e2edfda8f2df40f26 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/sstrip_orig_vol/sub-50137_T1w_conformed_calc.nii.gz -7bee7ef1ceb42f79794405292623610c81e6b215 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/binarize/sub-50152_T1w_conformed_calc_thresh.nii.gz -8beaab5b17d0a8a2c06757c4c2bf5e50c2c9372f /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_bias.nii.gz -23dbb0a8ed4ca82b5cb21157c5158da2336cb185 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_corrected.nii.gz -992b763f6ed8c7d8e585d777956db564a838d7dd /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/skullstrip/sub-50152_T1w_conformed_corrected_skullstrip.nii.gz -4d08e315da76a8e31daed832793b49659c3be557 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/sstrip_orig_vol/sub-50152_T1w_conformed_calc.nii.gz -6290999ab5dbb42af2f48f90dbaca890aec8c67a /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/binarize/sub-50785_T1w_conformed_calc_thresh.nii.gz -435fc08347b6bfd560270328a7581943cacad1f8 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_bias.nii.gz -0b174080aa03dc186defd543a55c5c7c5b2b545b /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_corrected.nii.gz -44f88a4467d20b8e6b7520085f7808f06f04d699 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/skullstrip/sub-50785_T1w_conformed_corrected_skullstrip.nii.gz -6ab77fd0bd3b5f2165fb0c8ed66013891194bbe9 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/sstrip_orig_vol/sub-50785_T1w_conformed_calc.nii.gz -2558f33c08f35c623d2a1be795bc2b418de8e373 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/binarize/sub-51187_T1w_conformed_calc_thresh.nii.gz -a97f362dee72cb164f98f1b8d8605526df61fac5 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_bias.nii.gz -2ff7d6c3048e6138532f40155fc0d9d3d10f7c1d /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_corrected.nii.gz -0d1f35263b25506ab595bf8107ab88bb2971bfbf /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/skullstrip/sub-51187_T1w_conformed_corrected_skullstrip.nii.gz -9ec4d6aa82716f5d660abc71c81b094f36b38e8a /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/sstrip_orig_vol/sub-51187_T1w_conformed_calc.nii.gz -ae0d13860d4d9f71a777125365376b787dd197b5 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/unifize_pre_skullstrip/sub-51187_T1w_conformed_corrected_generated.nii.gz +66b1134ac071c6716e490d3804554fa04778bbf3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/binarize/sub-50137_T1w_conformed_calc_thresh.nii.gz +15ccdd4645a6b8e0825312f2d3d3ebc8df8ed2e9 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_bias.nii.gz +3a3347b831762f5415bcc3d84a328facc5b56234 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/inu_n4/sub-50137_T1w_conformed_corrected.nii.gz +a3495421d86e2427599522bf63288e61bd1475e1 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/skullstrip/sub-50137_T1w_conformed_corrected_skullstrip.nii.gz +4b74d5cb8df64a8e84f4afc5844843c065aaf353 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/sstrip_orig_vol/sub-50137_T1w_conformed_calc.nii.gz +3d267af7824d80aa8e3d9b45eee4f556e731d64a /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/binarize/sub-50152_T1w_conformed_calc_thresh.nii.gz +7a80c649e8ca254a9768696a88a0faf41984c226 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_bias.nii.gz +9913213d42a58f86e9140eef3f2656dbc55c54fa /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/inu_n4/sub-50152_T1w_conformed_corrected.nii.gz +33ee7cfedc5542b32ba31d9d5b59e4fb3b02c15d /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/skullstrip/sub-50152_T1w_conformed_corrected_skullstrip.nii.gz +ef6fcdc8a1d66a98e1f95e4c87846368e5aebfa5 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/sstrip_orig_vol/sub-50152_T1w_conformed_calc.nii.gz +1e61cea44924558f34113d193a729b2795b4b6be /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/binarize/sub-50785_T1w_conformed_calc_thresh.nii.gz +2bb2f18bd079b27d53f5f57e38a29a223b1995f8 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_bias.nii.gz +409e6cac86d18b31a1e442fc7040f732ff4f7f37 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/inu_n4/sub-50785_T1w_conformed_corrected.nii.gz +46550dda2bae5bbf111b18a90dbdecc3e264fc77 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/skullstrip/sub-50785_T1w_conformed_corrected_skullstrip.nii.gz +360afdfdb7ffa81247f66a512a63f586fa5bbb08 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/sstrip_orig_vol/sub-50785_T1w_conformed_calc.nii.gz +553bcfd596c1c3e039d7966de6de712fd4fb81d7 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/binarize/sub-51187_T1w_conformed_calc_thresh.nii.gz +59a51baeb2e08e682eac1381e839ba5c8ca55814 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_bias.nii.gz +b015180ba2be5c4a92ee85dedf6ccaf2212c1289 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/inu_n4/sub-51187_T1w_conformed_corrected.nii.gz +0e645d84db56c9eeeb6a8677d16b3f9e0300c692 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/skullstrip/sub-51187_T1w_conformed_corrected_skullstrip.nii.gz +d6b81e9fd18782f0923a80b6a90fc4c725b32eb3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AFNISkullStripWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/sstrip_orig_vol/sub-51187_T1w_conformed_calc.nii.gz 46dbbcae9f4ec6fae7f9601b7ffea5f3527bdd1e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/ArtifactMask/sub-50137_T1w_conformed_artifacts.nii.gz -b5e52bcf33ff946d5ae2188e13204b74e62891f9 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/ArtifactMask/sub-50137_T1w_conformed_noart-air.nii.gz -0950af1d8dad6c7990714004be9963396f96592a /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -2d06dcdf4611b512ce99f8714101d3d49b259309 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +29c47e25bad037be24401a9f8da22577e8a007cf /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/ArtifactMask/sub-50137_T1w_conformed_noart-air.nii.gz +68dfb715f97c9839faeacd77525b058a87b8f2c6 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +17c76894ad331c613ba7087cf222768591a9a794 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz b512dc02495729f9ba0b13737f82e358a75072e4 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/ArtifactMask/sub-50152_T1w_conformed_artifacts.nii.gz -d4c75adfcfcdc1898997d034935355c659079711 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/ArtifactMask/sub-50152_T1w_conformed_noart-air.nii.gz -34fe60254d16cb7563238d75ce948065cee397fa /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -0ef4172b66bcffcd01016efac3fa315caa65202c /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +02910370c124790170078357288c8f16b6d1d7ec /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/ArtifactMask/sub-50152_T1w_conformed_noart-air.nii.gz +41ec7f1437b6b1c8b0af896b3044a1071bb640a2 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +8f6c9e7ad422debb2c59a3c28aff403809dfa4f2 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz aaafd84713bf0e7b43e45845c3c93228de07e735 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/ArtifactMask/sub-50785_T1w_conformed_artifacts.nii.gz -d9b38c6933d451b23a72d1b17bbca803c2ecc5aa /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/ArtifactMask/sub-50785_T1w_conformed_noart-air.nii.gz -384e80a9c8c8851aa12726d3f9ad349aca0367ef /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -29226039d035708e96e81fb1cf9686380efc3f4e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +175318586fb55d263f2da95ee5ed9c6ae52cc74b /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/ArtifactMask/sub-50785_T1w_conformed_noart-air.nii.gz +0efe1ec51bf514fcdd5358ef1e9ad844ab860277 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +0f4af4443af9b0f66d65aa38a68a3563e4715f9e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz 592e57ccb78ec6efe24709d15ccb6935df53c1c4 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/ArtifactMask/sub-51187_T1w_conformed_artifacts.nii.gz -f4f805c2defaf521534844edda0d44236f205d5e /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/ArtifactMask/sub-51187_T1w_conformed_noart-air.nii.gz -89323e00f9f2afe3f30a07429abeb6567871a010 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz -793900301d19b1a2df1b23ef21586f99f3ce77ba /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz -7b4c12e4a9001162df4a8612fbe28da587e88605 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/harmonize/sub-50137_T1w_conformed_corrected_harmonized.nii.gz -8e71e2f7a15007a211fbdffd588c8ba5d3bf1fd0 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -b2f30a02b9f39d4a138f66ca386a05e49475f261 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -541990de22b7c411eebf4cf6072e7291bd574e4c /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -9ccc567f59d6093d51a6b927699d4138cd2741a1 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/harmonize/sub-50152_T1w_conformed_corrected_harmonized.nii.gz -9d54dd5c92b4a8d506c3f3b0c5d437926273e285 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -24f4b764f7bce8c91003558eef9ec5c48ef66366 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -007904ab37c0c09a4e21deb42ada663a23489a74 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -76b8ff9405251a923bacbc377109f01626f27fbd /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/harmonize/sub-50785_T1w_conformed_corrected_harmonized.nii.gz -5fde01817809e98250365080a3298fce061d7c9b /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -980d211a9ee683483ddc1176356b7120ecf34c04 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -e4a1e57459bf8fad64c7c97bd878be1a684864ed /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -75bea54a77f76d84d0b5c5d867b4cd1a07005111 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/harmonize/sub-51187_T1w_conformed_corrected_harmonized.nii.gz -e67bcc9fa2170b0046039c6df9de1d8986348a40 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz -5669bf77cdf52b3e487878c9ccd2a60b49fa42d8 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz -11ec85ee8fcfd2dafe0f833898fea196e7344beb /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz -b1cf117f4163186ba1d51018be979e844b10108b /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/fsl_bet/sub-50137_T1w_conformed_corrected_brain_outskin_mask.nii.gz -a3bcd35d7c854de90ca0fadcac24f5b5311c3a27 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/fsl_bet/sub-50152_T1w_conformed_corrected_brain_outskin_mask.nii.gz -db44fc61d739e7b0c67b99ab324e0bf10638b8b6 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/fsl_bet/sub-50785_T1w_conformed_corrected_brain_outskin_mask.nii.gz -3a7c5685f1897b134f86e81302ff20c3e710574b /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/fsl_bet/sub-51187_T1w_conformed_corrected_brain_outskin_mask.nii.gz +5feb2b8a1ff88237d5631f5e66a80304f21778d3 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/ArtifactMask/sub-51187_T1w_conformed_noart-air.nii.gz +c75931ec5f1e1f5104bd25b90507be24e484aba0 /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/Binarize/1mm_headmask_trans_bin.nii.gz +083245f8226f08929d764e5d599665e84ee43d1f /scratch/work/workflow_enumerator/anatMRIQCT1w/AirMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/invert_xfm/1mm_headmask_trans.nii.gz +0089f13ee49aa6a1e6d23e902d5478bc0e455709 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/harmonize/sub-50137_T1w_conformed_corrected_harmonized.nii.gz +29cb0e176238cfdc8a8d0762cfc17792299d1d4e /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +52923c01b6af7557869ba5080c9f3915fca971a6 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +13b33085ef4661932f79575c704fad84dc3feb27 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +694f1916b589e295304f01b21f20d4a207c35a32 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/harmonize/sub-50152_T1w_conformed_corrected_harmonized.nii.gz +6e8c56697a9b42d687f94389e9032234a12815fd /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +896a69f791936edc6b3a8df7b178e685a7fb4ce3 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +b35d258e85fb743a68c22d15781963901b53d260 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +97d4f3b45f8e3bce616974ed2670de29af15dc6b /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/harmonize/sub-50785_T1w_conformed_corrected_harmonized.nii.gz +9c64016b484ba0010d339a5ffa3fb02c56ce2979 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +3558eb0db57f86fefb1d32ada58b7577c7862edb /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +7c199ce85f066e71ad4b7155d7447eee208499e7 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +31ad2f11cdf1dd7ea473abcb19388c9e8859d54e /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/harmonize/sub-51187_T1w_conformed_corrected_harmonized.nii.gz +ecd3eec83a91571c53ea8e5e7cd798dd7c53b5fc /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10/1mm_tpm_csf_trans.nii.gz +4747a4ba51f8722250422e246c09b9548215a162 /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11/1mm_tpm_gm_trans.nii.gz +1f11d6ab154435bd2455363597ab99cbfa1735fa /scratch/work/workflow_enumerator/anatMRIQCT1w/ComputeIQMs/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12/1mm_tpm_wm_trans.nii.gz +4200aa64620eebbf0ff4edb83c651060b902d01a /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/fsl_bet/sub-50137_T1w_conformed_corrected_brain_outskin_mask.nii.gz +f90b3629d96412cace1fd9288ac61efdb596a7f2 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/fsl_bet/sub-50152_T1w_conformed_corrected_brain_outskin_mask.nii.gz +bbebc568637e7f22d8fdb791aea32c3d22550220 /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/fsl_bet/sub-50785_T1w_conformed_corrected_brain_outskin_mask.nii.gz +00b0065df1a6f94e509c3a21e971c0be4e39247e /scratch/work/workflow_enumerator/anatMRIQCT1w/HeadMaskWorkflow/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/fsl_bet/sub-51187_T1w_conformed_corrected_brain_outskin_mask.nii.gz e49e0da89180585da7c9c052d5dc85bd018517b8 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/conform/sub-50137_T1w_conformed.nii.gz -d88700573bb0faa80cb72de2623a54706aeac5de /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -3547fe6793b9f117668882eb380c9758e3508950 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -4d19abce67954ce0e244ec3e2c6ae487590a5e4d /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -b2f6dc80b3b2cb3380ec6f3bb91ca78b47448aac /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_seg.nii.gz +b78b889fe80f3dd487bdd60b796e0cd532604ccd /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +220233a3e437ddf5a2aefe266b3c2c5b060a50db /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +be98a50ad103cda0c7acf5d77d56d2b39326176d /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +77837282d4a560ab168f5121e94c48ba47e9e9e6 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/segmentation/segment_seg.nii.gz 1d63b8dbc88a816b149cde842af7c23c262ce22a /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/conform/sub-50152_T1w_conformed.nii.gz -4631c7db469cc1fcba5bbdc39953d6fdd0d9d796 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -bbdb719497270ce93dbf735400b48fc4e9c7125f /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -1929645ed7b755278a61b2847d47ad624dcefdc8 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -e68d8e82875158586d50861233338bb07fc7da1c /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_seg.nii.gz +df336d6da74d4609424298ba8818d501785e9c90 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +e2c68a5b07c33eee90b31cd6ee0143bc0fb22894 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +9ffa4f5bd8259ac4074c17244db85b949668b090 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +59c3815a079592766dbd3645ffb97257ac42e281 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/segmentation/segment_seg.nii.gz eeda1696304a13628b1e086071dec0b205313983 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/conform/sub-50785_T1w_conformed.nii.gz -f16140c950c26b65721eb77e0a57e572a189f995 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -2255cc3815dcfca352a032e437eadfddc89f762c /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -a83a298134215a7664759e937a74cccff50b8133 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -e899893d3c481391bc03de8d003acea0f806bb5c /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_seg.nii.gz +2af16f3ada4e6d760219f03bf3390ac8153cce04 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +25fa1a32a1f4f8af94e86a7b172e1957a8e3ff3d /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +58a88d211961327efc74c389f4623e132c471c87 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +90bbdba73b3be1e2b3edc74fd8a1468ef697e619 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/segmentation/segment_seg.nii.gz a97dcf6fcd68b7d878a95e1ee263ea69771963f7 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/conform/sub-51187_T1w_conformed.nii.gz -71b194fecdcd24e8376055f57381e55d8e2e2145 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_0.nii.gz -2e04bcb4431e4211b82b9fdcf1b514e82be7b008 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_1.nii.gz -f3f4d17ca1aec6376be1b893c531377aa4ce42c8 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_2.nii.gz -01891773fe194a81ba0686d328e99993a8d27257 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_seg.nii.gz +6bb09fb63613a684caf93ad168c28db64d7bacf4 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_0.nii.gz +28fb5661dd39271459f730dec1e6acf35b04fa68 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_1.nii.gz +bdeb37c079135f8b3f71c31e3c932106f220d710 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_pve_2.nii.gz +96a2bf9e7163ca87815a661f3f9373b2e1d0b120 /scratch/work/workflow_enumerator/anatMRIQCT1w/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/segmentation/segment_seg.nii.gz 37988cff898c18df99ae41209e9e5e840dc0fcc4 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/FixedApplyMask/2mm_T1_masked.nii.gz -6c94f23397b0705af159b39e4cee8822b949a63c /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resampled.nii.gz -15b1b174a8170338f53be99ec70d945037d77213 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resmask.nii.gz -2a5b97a5fa70e86eb7436f9d9b7b5bd94b0c32ce /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MovingApplyMask/sub-50137_T1w_conformed_corrected_resampled_masked.nii.gz -a5610502972773b571119e760c8027380958d02f /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resampled.nii.gz -dd458ad212b773f1c855fe9d716a02c29fdd8ead /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resmask.nii.gz -4c085d9e8d3f7ed81a3ee0e678c6ac4d64ec68d2 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MovingApplyMask/sub-50152_T1w_conformed_corrected_resampled_masked.nii.gz -583bfc507591ca8d33131e29c4ab4edc724cb35c /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resampled.nii.gz -46b381e11b63dafdf9a4fe9bf62e2e9214d8db3b /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resmask.nii.gz -ed908136165138aa5019534cd54c3e97de86345f /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MovingApplyMask/sub-50785_T1w_conformed_corrected_resampled_masked.nii.gz -2715eab8da8f7a9eea3382b92cb1f22cb6ea50f1 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resampled.nii.gz -b768d7f41ec719ca358f76b490c3802e12e76540 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resmask.nii.gz -dffa0a3edf06c7027731f18cda0d0dcff86f8e6e /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MovingApplyMask/sub-51187_T1w_conformed_corrected_resampled_masked.nii.gz +ad147cd565cce63b23f547186e4b5cc425e76d1a /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resampled.nii.gz +1322c9be418cc31602c7b32c96f1eca231168247 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/EnsureSize/sub-50137_T1w_conformed_corrected_resmask.nii.gz +f379eec9c2e14334b3e47fa5b8c9ceaac21f12a2 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50137..anat..sub-50137_T1w.nii.gz/MovingApplyMask/sub-50137_T1w_conformed_corrected_resampled_masked.nii.gz +25cb53a04b545e28fa156462748ddc2084c277b7 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resampled.nii.gz +aa5f3b5b749de00bab13ea6f6e1efbe45b5e524b /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/EnsureSize/sub-50152_T1w_conformed_corrected_resmask.nii.gz +2e733dc289ef7532ab30ffe24c25df5d078842f9 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50152..anat..sub-50152_T1w.nii.gz/MovingApplyMask/sub-50152_T1w_conformed_corrected_resampled_masked.nii.gz +f6c38b8796001ff3b72e10cf6e2ebc142a8ef62c /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resampled.nii.gz +1381cbf3bc09fb7ab4e710a2e46ac811c53aff72 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/EnsureSize/sub-50785_T1w_conformed_corrected_resmask.nii.gz +df1bc1ae9a6e2c3bc821c8fb51d989ebeb76c1c1 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-50785..anat..sub-50785_T1w.nii.gz/MovingApplyMask/sub-50785_T1w_conformed_corrected_resampled_masked.nii.gz +6b98feff7713e87f57c3095efd930b00251f9cc9 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resampled.nii.gz +2b5d6f95c442a61cc9541c0af4a295d95bc52164 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/EnsureSize/sub-51187_T1w_conformed_corrected_resmask.nii.gz +28a965ac1324a2a851aa6a13e685aa98901a8071 /scratch/work/workflow_enumerator/anatMRIQCT1w/SpatialNormalization/_in_file_..data..circle-tests..sub-51187..anat..sub-51187_T1w.nii.gz/MovingApplyMask/sub-51187_T1w_conformed_corrected_resampled_masked.nii.gz