diff --git a/petprep/workflows/pet/hmc.py b/petprep/workflows/pet/hmc.py index 660ecda5..1f60bb99 100644 --- a/petprep/workflows/pet/hmc.py +++ b/petprep/workflows/pet/hmc.py @@ -271,7 +271,9 @@ def num_files(filelist): name='smooth', iterfield=['in_file'], ) - thresh = pe.MapNode(fsl.maths.Threshold(thresh=20), name='thresh', iterfield=['in_file']) + thresh = pe.MapNode( + fsl.maths.Threshold(thresh=20, use_robust_range=True), name='thresh', iterfield=['in_file'] + ) # Select reference frame start_frame = pe.Node(