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peaks warning while CSD reconstructing #1181

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salma1601 opened this Issue Feb 24, 2017 · 5 comments

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@salma1601

salma1601 commented Feb 24, 2017

Hi Dipy experts,

I systemtically have a warning when I FIT ConstrainedSphericalDeconvModel to my subjects data.
Is it something expected ?

/usr/lib/python2.7/dist-packages/dipy/direction/peaks.py:504: RuntimeWarning: invalid value encountered in double_scalars
return np.sqrt(numer / denom)

Thanks !

@Garyfallidis

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Garyfallidis commented Jun 30, 2017

Yes, it is expected. We are considering suppressing those warnings as they seem create more panic than help.

@arokem

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arokem commented Jun 30, 2017

How about doing something like this? #1289

@salma1601

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salma1601 commented Jun 30, 2017

We are considering suppressing those warnings as they seem create more panic than help

+1

@skoudoro skoudoro added this to Issues without PR in Dipy 0.14.0 Jan 17, 2018

@skoudoro skoudoro moved this from Issues without PR to WIP in Dipy 0.14.0 Feb 5, 2018

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skoudoro commented Feb 9, 2018

It seems to be done, can I close this issue?

@salma1601

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salma1601 commented Feb 9, 2018

yes, thanks

@skoudoro skoudoro closed this Feb 9, 2018

Dipy 0.14.0 automation moved this from WIP to Done Feb 9, 2018

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