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Errors in generating documents (.rst) of examples #1469

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RicciWoo opened this Issue Mar 20, 2018 · 0 comments

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RicciWoo commented Mar 20, 2018

When I ran examples, I encountered several issues or errors:

  • reconst_mapmri.py:
    1. MARMRI_maps_regularization.png: values in pictures are too small;
    2. odfs.png: visualization not rendered properly.
  • streamline_length.py:
    1. length_histogram.png, n_pts_histogram.png, lengths_plots.png: plots not saved in files;
    2. simulated_cosine_bundle.png: this image is all black.
  • linear_fascicle_evaluation.py: there is an error:
    File “~/dipy/dipy/tracking/life.py", line 492, in fit
    vox_data) = self._signals(data, vox_coords)
    File “~/dipy/dipy/tracking/life.py", line 443, in _signals
    vox_data = data[idx_tuple]
    IndexError: index 99 is out of bounds for axis 0 with size 81
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