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Advice for saving results from MAPMRI #1637
Hi @mattcieslak, pam5 is used for saving the results from peaks_from_model which can have any model that can generate ODFs (or FODs). This is used to primarily save ODFs (optional), their peaks and ODFs as spherical harmonics coefficients. To save the SHORE or MAPMRI models you can save directly their coefficients as Nifti images (dipy.io.image.save_nifti) and the same for their different maps/metrics.
But the real question is what you really want to do. What is the application in mind?
Hi @Garyfallidis, I just wanted to make sure I had all the necessary information to calculate propagator metrics and calculate ODFs after the lengthy fitting process is over. So It looks like is should just do a save_nifti on the coefficients and then re-load them in the appropriate model class and I can go about calculating ODFs and metrics?