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Cleaned PR for Visualization Modules to Assess the quality of Registration Qualitatively. #1606
This work was done as part of the Google Summer of Code (GSOC-2018) DIPY project titled 'DIPY Workflow(s) and Quality Assurance'
This work pertains to developing a workflow to visualize the quality of the registered images by creating a mosaic or the animation or both depending on the requirement. The plane to be visualized (Axial, Coronal or sagittal) can be easily controlled through the command line parameters.
This is a cleaned PR for the visualization modules developed to support the Image Registration Workflow(s). The PR1595 must not be merge now. Instead, this should be merged after making the changes in the core.py file for the GIF color range issues. The exact order of merging the PR's should be
PR1604 (affine registration workflow) -> PR1605 (apply transformation workflow) - > PR1606 (visualisation)
The link to the older PR (with all the conversations, commit history, improvements based on community feedback can be seen below):
@@ Coverage Diff @@ ## master #1606 +/- ## ========================================== - Coverage 87.34% 86.71% -0.64% ========================================== Files 246 249 +3 Lines 31811 32344 +533 Branches 3451 3519 +68 ========================================== + Hits 27785 28046 +261 - Misses 3204 3472 +268 - Partials 822 826 +4