From 2525682bf091ddcec5497e099c4f16efdb71e0ca Mon Sep 17 00:00:00 2001 From: Satrajit Ghosh Date: Wed, 8 May 2013 08:15:32 -0400 Subject: [PATCH] doc: clarify nipy slice timing --- nipype/interfaces/nipy/preprocess.py | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/nipype/interfaces/nipy/preprocess.py b/nipype/interfaces/nipy/preprocess.py index 55bd61c27f..46f514f9da 100644 --- a/nipype/interfaces/nipy/preprocess.py +++ b/nipype/interfaces/nipy/preprocess.py @@ -82,8 +82,12 @@ class FmriRealign4dInputSpec(BaseInterfaceInputSpec): desc="File to realign") tr = traits.Float(desc="TR in seconds", mandatory=True) - slice_order = traits.List(traits.Int(), - desc='0 based slice order', + slice_order = traits.List(traits.Int(), maxver=0.3, + desc=('0 based slice order. This would be equivalent to entering' + 'np.argsort(spm_slice_order) for this field. This effects' + 'interleaved acquisition. This field will be deprecated in' + 'future Nipy releases and be replaced by actual slice' + 'acquisition times.'), requires=["time_interp"]) tr_slices = traits.Float(desc="TR slices", requires=['time_interp']) start = traits.Float(0.0, usedefault=True,