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Rmarkdown for Scientists
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README.md

Project Status: WIP – Initial development is in progress, but there has not yet been a stable, usable release suitable for the public. Travis build status

Rmarkdown for Scientists

This is a book on rmarkdown, aimed for scientists. It was initially developed as a 3 hour workshop, but is now developed into a resource that will grow and change over time as a living book.

This book aims to teach the following:

  • Getting started with your own R Markdown document
  • Improve workflow:
    • With rstudio projects
    • Using keyboard shortcuts
  • Export your R Markdown document to PDF, HTML, and Microsoft Word
  • Better manage figures and tables
    • Reference figures and tables in text so that they dynamically update
    • Create captions for figures and tables
    • Change the size and type of figures
    • Save the figures to disk when creating an rmarkdown document
  • Work with equations
    • inline and display
    • caption equations
    • reference equations
  • Manage bibliographies
    • Cite articles in text
    • generate bibliographies
    • Change bibliography styles
  • Debug and handle common errors with rmarkdown
  • Next steps in working with rmarkdown - how to extend yourself to other rmarkdown formats

Creative Commons License
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.

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