/DNA-replication

Simulation of DNA replication
  1. Roff 61.6%
  2. C++ 23.7%
  3. Makefile 4.7%
  4. Shell 4.6%
  5. M4 4.5%
  6. Python 0.9%
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DNA_metropolis
replication
simtools
README.md

README.md

DNA-replication

This repository contains the source code for a 1D Simulation of DNA replication as well as a 3D chromatin simulation using a random loop DNA model. The simulations can be performed online at http://sim.bio.tu-darmstadt.de/.

Installation

The instructions for each application can be found in the subdirectories.

Reference

Löb, D. et al. 3D replicon distributions arise from stochastic initiation and domino-like DNA replication progression. Nat. Commun. 7:11207 doi: 10.1038/ncomms11207 (2016).

License

This application is released under the GPL License version 3.