@nmdp-bioinformatics

NMDP/Be The Match Bioinformatics Research

  • HLA ARD reduction in python

    Python 1 2 GPL-3.0 Updated Sep 8, 2018
  • Python package for doing fast and accurate sequence annotation

    Python 2 1 GPL-3.0 Updated Aug 31, 2018
  • Data Standards Hackathon for NGS based typing.

    HTML 6 7 LGPL-3.0 Updated Aug 29, 2018
  • Allele Calling Tool (ACT)

    Python 4 3 GPL-3.0 Updated Aug 28, 2018
  • HML to FHIR Conversion Application

    Java 1 5 LGPL-3.0 Updated Aug 17, 2018
  • Graph database representing IPD-IMGT/HLA sequence data as GFE

    Python 2 1 GPL-3.0 Updated Aug 13, 2018
  • Python package for creating GFE notation from annotated sequences

    Python 1 GPL-3.0 Updated Aug 8, 2018
  • Python package for working with HML

    Python 2 LGPL-3.0 Updated Aug 6, 2018
  • Python client for working with the ACT service

    Python 1 2 Updated Jul 26, 2018
  • Python package for creating FHIR resources with GFE

    Python 1 Updated Jul 24, 2018
  • Service used for curation of Haplotype Frequency

    Java 1 12 LGPL-3.0 Updated Jul 17, 2018
  • Apache Spark support for HML

    Scala 3 LGPL-3.0 Updated Jun 19, 2018
  • see README_AWS_SETUP.md for info about AWS deployment

    Shell 24 Updated Jun 14, 2018
  • pwm

    Forked from smart-on-fhir/pwm

    pwm

    Java 131 Updated Jun 6, 2018
  • Python 4 LGPL-3.0 Updated Jun 1, 2018
  • The IMGT/HLA sequence data persisted in a BioSQL database

    Python 1 1 GPL-3.0 Updated May 24, 2018
  • Sanity check for GL String

    Python 2 LGPL-3.0 Updated May 22, 2018
  • GRIMM: Graph IMputation and Matching for HLA Genotypes

    Python 2 LGPL-3.0 Updated May 16, 2018
  • netMHC Apache Spark CLI

    Scala 1 Updated May 16, 2018
  • Java 1 1 GPL-3.0 Updated May 15, 2018
  • Genotype List service, client library, and command line tools.

    Java 2 5 LGPL-3.0 Updated May 4, 2018
  • Service for getting a GFE from raw sequence data.

    Perl 3 GPL-3.0 Updated May 3, 2018
  • Immunogenetic Data Tools related to HLA, GLStrings, Linkage Disequilibrium

    Java 4 4 2 issues need help Updated Mar 31, 2018
  • Enumerated sequence feature service.

    Java 1 9 LGPL-3.0 Updated Nov 13, 2017
  • Next generation sequencing (NGS/HTS) tools.

    Java 16 13 LGPL-3.0 Updated Nov 13, 2017
  • Java GPL-3.0 Updated Nov 10, 2017
  • JavaScript MIT Updated Oct 4, 2017
  • Java GPL-3.0 Updated Oct 4, 2017
  • Java GPL-3.0 Updated Oct 4, 2017
  • Java GPL-3.0 Updated Oct 4, 2017
  • 0

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