diff --git a/Makefile b/Makefile index 882610a..c72f3fd 100644 --- a/Makefile +++ b/Makefile @@ -34,7 +34,7 @@ clean-build: ## remove build artifacts rm -fr dist/ rm -fr .eggs/ find . -name '*.egg-info' -exec rm -fr {} + - find . -name '*.egg' -exec rm -f {} + + find . -name '*.egg' -exec rm -rf {} + clean-pyc: ## remove Python file artifacts find . -name '*.pyc' -exec rm -f {} + @@ -99,21 +99,3 @@ activate: ## activate a virtual environment. Run `make venv` before activating. @echo "To activate the new virtualenv, execute the following from your shell" @echo "source $(PWD)/venv/bin/activate" -git-init: ## initializes a git repository. Commits and pushes to github. - @echo "=====================================================================" - @echo "Make sure you've created a github repo 'mhalagan-nmdp/pyars'" - @read -p "Continue? [Y/N] " choice; \ - case "$$choice" in \ - y | Y ) \ - echo "====================================================================="; \ - git init . ; \ - git add . ; \ - git commit -m "Initial Import" ; \ - git remote add origin https://github.com/mhalagan-nmdp/pyars ; \ - git push -u origin master; \ - echo "====================================================================="; \ - echo "Git Initialized!" \ - ;; \ - * ) echo "Git NOT initialized!" ;; \ - esac; - diff --git a/setup.py b/setup.py index d25f95e..889f91b 100644 --- a/setup.py +++ b/setup.py @@ -32,24 +32,7 @@ history = history_file.read() requirements = [ - 'certifi==2018.1.18', - 'chardet==3.0.4', - 'idna==2.6', - 'mypy==0.560', - 'numpy', - 'pandas', - 'pkginfo==1.4.1', - 'psutil==5.4.3', - 'python-dateutil==2.6.1', - 'pytz==2018.3', - 'requests==2.20.0', - 'requests-toolbelt==0.8.0', - 'six==1.11.0', - 'tqdm==4.19.5', - 'typed-ast==1.1.0', - 'typing==3.6.4', - 'urllib3==1.24.2', - 'xlrd==1.1.0' + 'pandas==0.25.1' ] @@ -58,13 +41,13 @@ ] setup( - name='pyard', - version='0.0.10', + name='py-ard', + version='0.0.11', description="ARD reduction for HLA with python", long_description=readme + '\n\n' + history, - author="Michael Halagan", - author_email='mhalagan@nmdp.org', - url='https://github.com/nmdp-bioinformatics/pyARD', + author="CIBMTR", + author_email='cibmtr-pypi@nmdp.org', + url='https://github.com/nmdp-bioinformatics/py-ard', packages=[ 'pyard', ], @@ -79,14 +62,6 @@ 'Intended Audience :: Developers', 'License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)', 'Natural Language :: English', - "Programming Language :: Python :: 2", - 'Programming Language :: Python :: 2.6', - 'Programming Language :: Python :: 2.7', - 'Programming Language :: Python :: 3', - 'Programming Language :: Python :: 3.3', - 'Programming Language :: Python :: 3.4', - 'Programming Language :: Python :: 3.5', - 'Programming Language :: Python :: 3.6', 'Programming Language :: Python :: 3.7', ], test_suite='tests',