diff --git a/README.rst b/README.rst index 1e57502..d316384 100644 --- a/README.rst +++ b/README.rst @@ -1,5 +1,5 @@ =============================== -pyARD +py-ard =============================== @@ -17,19 +17,22 @@ ARD reduction for HLA with python * Documentation: https://pyard.readthedocs.io. -Install -------- +Install from source +------------------- .. code-block:: - # from source python3 -m venv venv source venv/bin/activate - pip install -r requirements.txt + python setup.py install - # from PyPi - pip install pyard +Install from PyPi +----------------- + +.. code-block:: + + pip install py-ard Example @@ -61,11 +64,3 @@ Example # 'B*07:02:01G+B*07:02:01G^A*01:01:01G+A*02:01:01G/A*02:02' -Credits ---------- - -This package was created with Cookiecutter_ and the `audreyr/cookiecutter-pypackage`_ project template. - -.. _Cookiecutter: https://github.com/audreyr/cookiecutter -.. _`audreyr/cookiecutter-pypackage`: https://github.com/audreyr/cookiecutter-pypackage - diff --git a/pyard/pyard.py b/pyard/pyard.py index 7dfd3bf..3690525 100644 --- a/pyard/pyard.py +++ b/pyard/pyard.py @@ -435,7 +435,7 @@ def redux_gl(self, glstring: str, redux_type: str) -> str: def isvalid(self, allele: str) -> str: """ - Determines valididy of an allele + Determines validity of an allele :param allele: An HLA allele. :type: str diff --git a/requirements.txt b/requirements.txt deleted file mode 100644 index def159f..0000000 --- a/requirements.txt +++ /dev/null @@ -1,6 +0,0 @@ -numpy==1.14.0 -pandas==0.22.0 -python-dateutil==2.6.1 -pytz==2018.3 -six==1.11.0 -typing==3.6.4