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@epigen @databio

Pinned repositories

  1. LOLA

    Locus Overlap Analysis: Enrichment of Genomic Ranges

    R 30 7

  2. docker

    Dockerfiles for R development, jekyll serving, graphics, etc.

    R 4

  3. databio/simpleCache

    Quick R caching for reproducible big data projects

    R 14 3

  4. epigen/pypiper

    Python toolkit for building restartable pipelines

    Python 12 3

  5. epigen/looper

    A python-based pipeline submission engine and project manager.

    Python 11 4

1,779 contributions in the last year

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Contribution activity First pull request First issue First repository Joined GitHub

October 2017

Created an issue in epigen/looper that received 17 comments

looper speed

I've noticed in my tests today that looper seems to go really slowly through the samples. When turning on debug it's clear that it pauses for a spl…

11 contributions in private repositories Oct 9 – Oct 20

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