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Organizations

@epigen @databio

Pinned repositories

  1. LOLA

    Locus Overlap Analysis: Enrichment of Genomic Ranges

    R 37 11

  2. docker

    Dockerfiles for R development, jekyll serving, graphics, etc.

    Shell 5

  3. databio/simpleCache

    Simplified R caching for reproducible big data projects

    R 22 3

  4. databio/pypiper

    Python toolkit for building restartable pipelines

    Python 21 6

  5. pepkit/peppy

    A python-based project metadata manager for portable encapsulated projects

    Python 21 5

  6. pepkit/looper

    A job submitter that uses Portable Encapsulated Projects

    Python 5 2

2,076 contributions in the last year

Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Mon Wed Fri

Contribution activity

November 2018

Created a pull request in databio/pypiper that received 3 comments

Release for v0.9

To do: Finish last few minor issues tagged as 0.9 Update CHANGELOG

+197 −168 3 comments

Created an issue in pepkit/geofetch that received 7 comments

add pipeline interface argument

geofetch could add a new command-line argument that would allow the user to automatically add a pipeline_interface attribute to the project, so it …

7 comments
52 contributions in private repositories Nov 1 – Nov 14

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