Added Copyright notice to all Java files. This had the side-effect of…

… changing the line delimiter to the Unix format. As such, some files have had all their lines affected, others only a subset.
obiba · Oct 16, 2008 · 90ee61b · 90ee61b
1 parent aa4b511
commit 90ee61b
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diff --git a/LICENSE b/LICENSE
diff --git a/...webapp/src/main/java/org/obiba/onyx/cartagene/etl/participant/ParticipantExcelReader.java b/...webapp/src/main/java/org/obiba/onyx/cartagene/etl/participant/ParticipantExcelReader.java
@@ -1,51 +1,60 @@
-package org.obiba.onyx.cartagene.etl.participant;
-
-import org.apache.poi.hssf.usermodel.HSSFFormulaEvaluator;
-import org.apache.poi.hssf.usermodel.HSSFRow;
-import org.obiba.onyx.core.domain.participant.Appointment;
-import org.obiba.onyx.core.domain.participant.Gender;
-import org.obiba.onyx.core.domain.participant.Participant;
-import org.obiba.onyx.core.domain.participant.Province;
-import org.obiba.onyx.core.etl.participant.AbstractParticipantExcelReader;
-import org.slf4j.Logger;
-import org.slf4j.LoggerFactory;
-
-public class ParticipantExcelReader extends AbstractParticipantExcelReader {
-
-  @SuppressWarnings("unused")
-  private static final Logger log = LoggerFactory.getLogger(ParticipantExcelReader.class);
-
-  protected Participant processParticipant(HSSFRow row, HSSFFormulaEvaluator evaluator) {
-    Participant participant = new Participant();
-
-    participant.setSiteNo(getTextValue(row, evaluator, row.getCell(2)));
-    participant.setFirstName(getTextValue(row, evaluator, row.getCell(5)));
-    participant.setLastName(getTextValue(row, evaluator, row.getCell(4)));
-    Long id = getNumericValue(row, evaluator, row.getCell(3)).longValue();
-    participant.setEnrollmentId(id == null ? null : id.toString());
-    participant.setBirthDate(getDateValue(row, evaluator, row.getCell(7)));
-    String gender = getTextValue(row, evaluator, row.getCell(6));
-    if(gender.equals("M")) {
-      participant.setGender(Gender.MALE);
-    } else if(gender.equals("F")) {
-      participant.setGender(Gender.FEMALE);
-    }
-    participant.setStreet(getTextValue(row, evaluator, row.getCell(8)));
-    participant.setCity(getTextValue(row, evaluator, row.getCell(9)));
-    participant.setProvince(Province.valueOf(getTextValue(row, evaluator, row.getCell(10))));
-    participant.setCountry(getTextValue(row, evaluator, row.getCell(11)));
-    participant.setPostalCode(getTextValue(row, evaluator, row.getCell(12)));
-    participant.setPhone(getTextValue(row, evaluator, row.getCell(13)));
-
-    return participant;
-  }
-
-  protected Appointment processAppointment(HSSFRow row, HSSFFormulaEvaluator evaluator) {
-    Appointment appointment = new Appointment();
-
-    appointment.setAppointmentCode(getTextValue(row, evaluator, row.getCell(3)));
-    appointment.setDate(getDateValue(row, evaluator, row.getCell(0)));
-
-    return appointment;
-  }
-}
+/*******************************************************************************
+ * Copyright 2008(c) The OBiBa Consortium. All rights reserved.
+ * 
+ * This program and the accompanying materials
+ * are made available under the terms of the GNU Public License v3.0.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ ******************************************************************************/
+package org.obiba.onyx.cartagene.etl.participant;
+
+import org.apache.poi.hssf.usermodel.HSSFFormulaEvaluator;
+import org.apache.poi.hssf.usermodel.HSSFRow;
+import org.obiba.onyx.core.domain.participant.Appointment;
+import org.obiba.onyx.core.domain.participant.Gender;
+import org.obiba.onyx.core.domain.participant.Participant;
+import org.obiba.onyx.core.domain.participant.Province;
+import org.obiba.onyx.core.etl.participant.AbstractParticipantExcelReader;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+public class ParticipantExcelReader extends AbstractParticipantExcelReader {
+
+  @SuppressWarnings("unused")
+  private static final Logger log = LoggerFactory.getLogger(ParticipantExcelReader.class);
+
+  protected Participant processParticipant(HSSFRow row, HSSFFormulaEvaluator evaluator) {
+    Participant participant = new Participant();
+
+    participant.setSiteNo(getTextValue(row, evaluator, row.getCell(2)));
+    participant.setFirstName(getTextValue(row, evaluator, row.getCell(5)));
+    participant.setLastName(getTextValue(row, evaluator, row.getCell(4)));
+    Long id = getNumericValue(row, evaluator, row.getCell(3)).longValue();
+    participant.setEnrollmentId(id == null ? null : id.toString());
+    participant.setBirthDate(getDateValue(row, evaluator, row.getCell(7)));
+    String gender = getTextValue(row, evaluator, row.getCell(6));
+    if(gender.equals("M")) {
+      participant.setGender(Gender.MALE);
+    } else if(gender.equals("F")) {
+      participant.setGender(Gender.FEMALE);
+    }
+    participant.setStreet(getTextValue(row, evaluator, row.getCell(8)));
+    participant.setCity(getTextValue(row, evaluator, row.getCell(9)));
+    participant.setProvince(Province.valueOf(getTextValue(row, evaluator, row.getCell(10))));
+    participant.setCountry(getTextValue(row, evaluator, row.getCell(11)));
+    participant.setPostalCode(getTextValue(row, evaluator, row.getCell(12)));
+    participant.setPhone(getTextValue(row, evaluator, row.getCell(13)));
+
+    return participant;
+  }
+
+  protected Appointment processAppointment(HSSFRow row, HSSFFormulaEvaluator evaluator) {
+    Appointment appointment = new Appointment();
+
+    appointment.setAppointmentCode(getTextValue(row, evaluator, row.getCell(3)));
+    appointment.setDate(getDateValue(row, evaluator, row.getCell(0)));
+
+    return appointment;
+  }
+}
diff --git a/cartagene-webapp/src/main/java/org/obiba/onyx/cartagene/hibernate/util/CreateDDL.java b/cartagene-webapp/src/main/java/org/obiba/onyx/cartagene/hibernate/util/CreateDDL.java
@@ -1,114 +1,123 @@
-package org.obiba.onyx.cartagene.hibernate.util;
-
-import java.io.ByteArrayInputStream;
-import java.util.Properties;
-import java.util.Set;
-
-import org.hibernate.cfg.AnnotationConfiguration;
-import org.hibernate.cfg.Configuration;
-import org.hibernate.cfg.ImprovedNamingStrategy;
-import org.hibernate.tool.hbm2ddl.SchemaExport;
-import org.springframework.beans.factory.xml.XmlBeanDefinitionReader;
-import org.springframework.context.support.GenericApplicationContext;
-import org.springframework.core.io.FileSystemResource;
-
-public class CreateDDL {
-
-  // System constants for the current platform directory token
-  static String fileSep = System.getProperty("file.separator");
-
-  private String path = "";
-
-  private static GenericApplicationContext appContext;
-
-  public static void main(String args[]) {
-
-    // Create application context.
-    appContext = loadAppContext();
-
-    CreateDDL c = new CreateDDL();
-    c.createDDL();
-    System.err.println("Finish");
-  }
-
-  protected static GenericApplicationContext loadAppContext() {
-
-    // Load bootstrap context files.
-    GenericApplicationContext appContext = new GenericApplicationContext();
-    XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(appContext);
-    xmlReader.loadBeanDefinitions(new FileSystemResource("src/main/webapp/WEB-INF/spring/context.xml"));
-    appContext.refresh();
-
-    return appContext;
-  }
-
-  protected static Properties loadServiceParams(String[] args) {
-
-    Properties params = new Properties();
-    try {
-
-      params.loadFromXML(new ByteArrayInputStream(args[0].getBytes("UTF-8")));
-      return params;
-
-    } catch(Exception wErrorLoadingXml) {
-      throw new RuntimeException("Error! Client was unable to load application parameters.");
-    }
-
-  }
-
-  public CreateDDL() {
-  }
-
-  private AnnotationConfiguration getConfiguration() {
-    try {
-      AnnotationConfiguration conf = new AnnotationConfiguration();
-
-      Set<Class<?>> annotatedClasses = (Set<Class<?>>) appContext.getBean("annotatedHibernateClasses");
-      for(Class cl : annotatedClasses) {
-        conf.addAnnotatedClass(cl);
-      }
-
-      // naming strategie
-      conf.setNamingStrategy(ImprovedNamingStrategy.INSTANCE);
-
-      Properties props = new Properties();
-      props.put("hibernate.dialect", "org.hibernate.dialect.MySQL5InnoDBDialect");
-
-      conf.addProperties(props);
-      return conf;
-    } catch(Throwable ex) {
-      // Log exception!
-      throw new ExceptionInInitializerError(ex);
-    }
-  }
-
-  /**
-   * Loads the Hibernate configuration information, sets up the database and the Hibernate session factory.
-   */
-  public void createDDL() {
-    System.out.println("testCreateDDL");
-    try {
-      Configuration conf = getConfiguration();
-      String dialect_file = "mysql.sql";
-
-      System.out.println("Generating: " + dialect_file);
-      SchemaExport mySchemaExport = new SchemaExport(conf, conf.buildSettings());
-      mySchemaExport.setDelimiter(";");
-
-      // Despite the name, the generated create
-      // scripts WILL include drop statements at
-      // the top of the script!
-      mySchemaExport.setOutputFile(path + "create_" + dialect_file);
-      mySchemaExport.create(false, false);
-
-      // Generates DROP statements only
-      mySchemaExport.setOutputFile(path + "drop_" + dialect_file);
-      mySchemaExport.drop(false, false);
-
-      System.out.println(dialect_file + " OK.");
-    } catch(Exception e) {
-      e.printStackTrace();
-    }
-  }
-
-}
+/*******************************************************************************
+ * Copyright 2008(c) The OBiBa Consortium. All rights reserved.
+ * 
+ * This program and the accompanying materials
+ * are made available under the terms of the GNU Public License v3.0.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ ******************************************************************************/
+package org.obiba.onyx.cartagene.hibernate.util;
+
+import java.io.ByteArrayInputStream;
+import java.util.Properties;
+import java.util.Set;
+
+import org.hibernate.cfg.AnnotationConfiguration;
+import org.hibernate.cfg.Configuration;
+import org.hibernate.cfg.ImprovedNamingStrategy;
+import org.hibernate.tool.hbm2ddl.SchemaExport;
+import org.springframework.beans.factory.xml.XmlBeanDefinitionReader;
+import org.springframework.context.support.GenericApplicationContext;
+import org.springframework.core.io.FileSystemResource;
+
+public class CreateDDL {
+
+  // System constants for the current platform directory token
+  static String fileSep = System.getProperty("file.separator");
+
+  private String path = "";
+
+  private static GenericApplicationContext appContext;
+
+  public static void main(String args[]) {
+
+    // Create application context.
+    appContext = loadAppContext();
+
+    CreateDDL c = new CreateDDL();
+    c.createDDL();
+    System.err.println("Finish");
+  }
+
+  protected static GenericApplicationContext loadAppContext() {
+
+    // Load bootstrap context files.
+    GenericApplicationContext appContext = new GenericApplicationContext();
+    XmlBeanDefinitionReader xmlReader = new XmlBeanDefinitionReader(appContext);
+    xmlReader.loadBeanDefinitions(new FileSystemResource("src/main/webapp/WEB-INF/spring/context.xml"));
+    appContext.refresh();
+
+    return appContext;
+  }
+
+  protected static Properties loadServiceParams(String[] args) {
+
+    Properties params = new Properties();
+    try {
+
+      params.loadFromXML(new ByteArrayInputStream(args[0].getBytes("UTF-8")));
+      return params;
+
+    } catch(Exception wErrorLoadingXml) {
+      throw new RuntimeException("Error! Client was unable to load application parameters.");
+    }
+
+  }
+
+  public CreateDDL() {
+  }
+
+  private AnnotationConfiguration getConfiguration() {
+    try {
+      AnnotationConfiguration conf = new AnnotationConfiguration();
+
+      Set<Class<?>> annotatedClasses = (Set<Class<?>>) appContext.getBean("annotatedHibernateClasses");
+      for(Class cl : annotatedClasses) {
+        conf.addAnnotatedClass(cl);
+      }
+
+      // naming strategie
+      conf.setNamingStrategy(ImprovedNamingStrategy.INSTANCE);
+
+      Properties props = new Properties();
+      props.put("hibernate.dialect", "org.hibernate.dialect.MySQL5InnoDBDialect");
+
+      conf.addProperties(props);
+      return conf;
+    } catch(Throwable ex) {
+      // Log exception!
+      throw new ExceptionInInitializerError(ex);
+    }
+  }
+
+  /**
+   * Loads the Hibernate configuration information, sets up the database and the Hibernate session factory.
+   */
+  public void createDDL() {
+    System.out.println("testCreateDDL");
+    try {
+      Configuration conf = getConfiguration();
+      String dialect_file = "mysql.sql";
+
+      System.out.println("Generating: " + dialect_file);
+      SchemaExport mySchemaExport = new SchemaExport(conf, conf.buildSettings());
+      mySchemaExport.setDelimiter(";");
+
+      // Despite the name, the generated create
+      // scripts WILL include drop statements at
+      // the top of the script!
+      mySchemaExport.setOutputFile(path + "create_" + dialect_file);
+      mySchemaExport.create(false, false);
+
+      // Generates DROP statements only
+      mySchemaExport.setOutputFile(path + "drop_" + dialect_file);
+      mySchemaExport.drop(false, false);
+
+      System.out.println(dialect_file + " OK.");
+    } catch(Exception e) {
+      e.printStackTrace();
+    }
+  }
+
+}