Permalink
Switch branches/tags
Nothing to show
Find file Copy path
Fetching contributors…
Cannot retrieve contributors at this time
60 lines (43 sloc) 1.65 KB

OBiBa Opal Documentation

Targeted at individual studies and study consortia, OBiBa software stack (Opal, Mica etc.) provides a software solution for epidemiological data management, analysis and publication. Opal is the core data warehouse application that provides all the necessary tools to import, transform and describe data. Opal can be used with Agate, the OBiBa's central authentication server.

Warning

Opal documentation is in the process of being rewritten. See also the :download:`Opal Documentation Archive <archive/OPALDOC.pdf>`

.. toctree::
   :maxdepth: 1

   introduction

.. toctree::
   :maxdepth: 1
   :caption: Administrator Guide

   admin/installation
   admin/configuration
   admin/plugins
   admin/rserver

.. toctree::
   :maxdepth: 1
   :caption: Web User Guide

   web-user-guide/index
   web-user-guide/projects
   web-user-guide/search
   web-user-guide/administration

.. toctree::
   :maxdepth: 1
   :caption: R DataSHIELD User Guide

   r-user-guide/index
   r-user-guide/r
   r-user-guide/datashield
   r-user-guide/reporting

.. toctree::
   :maxdepth: 1
   :caption: Python User Guide

   python-user-guide/index
   python-user-guide/commands

.. toctree::
  :maxdepth: 1
  :caption: Magma Javascript API

  magma-user-guide/index
  magma-user-guide/methods