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new releases. Fixes #453 and #455

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1 parent 2dd460c commit 08a7a6231504b44b25f5e568289e69b58794eafc @cmungall cmungall committed Nov 23, 2016
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@@ -1657,7 +1657,7 @@ def: "A cell that stores epinephrine secretory vesicles. During times of stress,
synonym: "phaeochromocyte" EXACT []
xref: BTO:0000259
xref: FMA:69263
-is_a: CL:0000568 ! APUD cell
+is_a: CL:0000568 ! amine precursor uptake and decarboxylation cell
[Term]
id: CL:0000167
@@ -4013,7 +4013,7 @@ is_a: CL:0000174 ! steroid hormone secreting cell
id: CL:0000457
name: biogenic amine secreting cell
namespace: cell
-is_a: CL:0000163 ! endocrine cell
+is_a: CL:0000151 ! secretory cell
[Term]
id: CL:0000458
@@ -4993,10 +4993,10 @@ is_a: CL:0000198 ! pain receptor cell
[Term]
id: CL:0000568
-name: APUD cell
+name: amine precursor uptake and decarboxylation cell
namespace: cell
def: "A cell that originates in the neural crest, that has certain cytochemical and ultrastructural characteristics and is found scattered throughout the body; types include melanocytes, the cells of the chromaffin system, and cells in the hypothalamus, hypophysis, thyroid, parathyroids, lungs, gastrointestinal tract, and pancreas. This cell type concentrates the amino acid precursors of certain amines and decarboxylate them, forming amines that function as regulators and neurotransmitters. This cell type produces substances such as epinephrine, norepinephrine, dopamine, serotonin, enkephalin, somatostatin, neurotensin, and substance P, the actions of which may affect contiguous cells, nearby groups of cells, or distant cells, thus functioning as local or systemic hormones. The name is an acronym for amine precursor uptake and decarboxylation cell." [GOC:tfm, ISBN:0721662544, MESH:A11.070]
-synonym: "amine precursor uptake and decarboxylation cell" EXACT []
+synonym: "APUD cell" EXACT []
xref: BTO:0003866
xref: FMA:83114
is_a: CL:0000165 ! neuroendocrine cell
@@ -7752,8 +7752,8 @@ synonym: "5-hydroxytryptamine neuron" EXACT []
synonym: "serotinergic neuron" RELATED []
xref: FBbt:00005133
xref: WBbt:0006837
-is_a: CL:0000381 ! neurosecretory neuron
is_a: CL:0000458 ! serotonin secreting cell
+is_a: CL:0000540 ! neuron
[Term]
id: CL:0000851
@@ -12733,7 +12733,7 @@ id: CL:0002250
name: intestinal crypt stem cell
namespace: cell
def: "A cell that is found in a zone occupying the bottom region of the crypt; provide the source of most of the cell types of the intestinal epithelium; proliferate by mitotic division; differentiates into columnar or goblet cells." [GOC:tfm, ISBN:0517223651]
-synonym: "stem cell of intestinal crypt of lieberkuhn" EXACT []
+synonym: "stem cell of intestinal crypt of Lieberkuhn" EXACT []
xref: FMA:63379
is_a: CL:0000048 ! multi fate stem cell
is_a: CL:0002563 ! intestinal epithelial cell
@@ -17796,8 +17796,8 @@ is_a: CL:0000163 ! endocrine cell
id: CL:0008025
name: noradrenergic neuron
def: "A neuron that release noradrenaline (noriphinephrine) as a neurotransmitter." [GOC:dos]
-is_a: CL:0000381 ! neurosecretory neuron
is_a: CL:0000459 ! noradrenergic cell
+is_a: CL:0000540 ! neuron
[Term]
id: CL:0008026
@@ -18035,9 +18035,8 @@ is_a: CL:0000617 ! GABAergic neuron
[Term]
id: CL:0011006
-name: lugaro cell
+name: Lugaro cell
def: "An inhibitory GABAergic interneuron found in the cerebellar cortex." [GOC:nv]
-synonym: "Lugaro cell" EXACT []
is_a: CL:0000402 ! CNS interneuron
is_a: CL:0011005 ! GABAergic interneuron
is_a: CL:1001611 ! cerebellar neuron
@@ -18159,7 +18158,7 @@ is_a: CL:0000540 ! neuron
id: CL:0011110
name: histaminergic neuron
def: "Neuron that secretes histamine." [PMID:22677810]
-is_a: CL:0000381 ! neurosecretory neuron
+is_a: CL:0000540 ! neuron
is_a: CL:0002274 ! histamine secreting cell
[Term]
@@ -18883,7 +18882,7 @@ is_a: CL:0002254 ! epithelial cell of small intestine
[Term]
id: CL:1000338
-name: enterocyte of epithelium of crypt of lieberkuhn of small intestine
+name: enterocyte of epithelium of crypt of Lieberkuhn of small intestine
namespace: cell
def: "An enterocyte that is part of the epithelium of crypt of lieberkuhn of small intestine." [GOC:tfm]
xref: FMA:263094
@@ -18940,7 +18939,7 @@ is_a: CL:1000343 ! paneth cell of epithelium of small intestine
[Term]
id: CL:1000345
-name: paneth cell of epithelium of crypt of lieberkuhn of small intestine
+name: paneth cell of epithelium of crypt of Lieberkuhn of small intestine
namespace: cell
def: "A Paneth cell that is part of the epithelium of crypt of lieberkuhn of small intestine." [GOC:tfm]
xref: FMA:263108
@@ -19204,7 +19203,7 @@ is_a: CL:2000046 ! ventricular cardiac muscle cell
[Term]
id: CL:1000376
-name: purkinje myocyte of interventricular septum
+name: Purkinje myocyte of interventricular septum
namespace: cell
def: "A Purkinje myocyte that is part of the interventricular septum." [GOC:tfm]
xref: FMA:263182
@@ -19393,7 +19392,7 @@ is_a: CL:2000022 ! cardiac septum native cell
[Term]
id: CL:1000411
-name: endothelial cell of peyer's patch
+name: endothelial cell of Peyer's patch
namespace: cell
def: "An endothelial cell that is part of the small intestine Peyer's patch." [GOC:tfm]
xref: FMA:67757
@@ -19700,7 +19699,7 @@ name: epithelial cell of intermediate tubule
namespace: cell
def: "An epithelial cell that is part of the intermediate tubule." [GOC:tfm]
xref: FMA:70980
-is_a: CL:1000909 ! kidney loop of henle epithelial cell
+is_a: CL:1000909 ! kidney loop of Henle epithelial cell
[Term]
id: CL:1000454
@@ -19836,7 +19835,7 @@ is_a: CL:1000409 ! myocyte of sinoatrial node
[Term]
id: CL:1000479
-name: purkinje myocyte of atrioventricular node
+name: Purkinje myocyte of atrioventricular node
namespace: cell
def: "A Purkinje myocyte that is part of the atrioventricular node." [GOC:tfm]
xref: FMA:83386
@@ -19874,7 +19873,7 @@ is_a: CL:2000022 ! cardiac septum native cell
[Term]
id: CL:1000483
-name: purkinje myocyte of internodal tract
+name: Purkinje myocyte of internodal tract
namespace: cell
def: "A Purkinje myocyte that is part of the internodal tract." [GOC:tfm]
xref: FMA:83392
@@ -19883,7 +19882,7 @@ is_a: CL:0002096 ! internodal tract myocyte
[Term]
id: CL:1000484
-name: purkinje myocyte of atrioventricular bundle
+name: Purkinje myocyte of atrioventricular bundle
namespace: cell
def: "A Purkinje myocyte that is part of the atrioventricular bundle." [GOC:tfm]
xref: FMA:83393
@@ -20373,7 +20372,7 @@ namespace: cell
xref: KUPO:0001046
is_a: CL:0002306 ! epithelial cell of proximal tubule
is_a: CL:1000616 ! kidney outer medulla cell
-is_a: CL:1001021 ! kidney loop of henle descending limb epithelial cell
+is_a: CL:1001021 ! kidney loop of Henle descending limb epithelial cell
[Term]
id: CL:1000849
@@ -20422,7 +20421,7 @@ is_a: CL:1000854 ! kidney blood vessel cell
[Term]
id: CL:1000909
-name: kidney loop of henle epithelial cell
+name: kidney loop of Henle epithelial cell
namespace: cell
xref: KUPO:0001047
is_a: CL:1000494 ! nephron tubule epithelial cell
@@ -20463,18 +20462,18 @@ is_a: CL:1000891 ! kidney arterial blood vessel cell
[Term]
id: CL:1001016
-name: kidney loop of henle ascending limb epithelial cell
+name: kidney loop of Henle ascending limb epithelial cell
namespace: cell
xref: KUPO:0001048
is_a: CL:0002305 ! epithelial cell of distal tubule
-is_a: CL:1000909 ! kidney loop of henle epithelial cell
+is_a: CL:1000909 ! kidney loop of Henle epithelial cell
[Term]
id: CL:1001021
-name: kidney loop of henle descending limb epithelial cell
+name: kidney loop of Henle descending limb epithelial cell
namespace: cell
xref: KUPO:0001053
-is_a: CL:1000909 ! kidney loop of henle epithelial cell
+is_a: CL:1000909 ! kidney loop of Henle epithelial cell
[Term]
id: CL:1001033
@@ -20570,43 +20569,43 @@ is_a: CL:1001066 ! kidney arteriole smooth muscle cell
[Term]
id: CL:1001106
-name: kidney loop of henle thick ascending limb epithelial cell
+name: kidney loop of Henle thick ascending limb epithelial cell
namespace: cell
xref: KUPO:0001049
is_a: CL:1000504 ! kidney medulla cell
-is_a: CL:1001016 ! kidney loop of henle ascending limb epithelial cell
+is_a: CL:1001016 ! kidney loop of Henle ascending limb epithelial cell
[Term]
id: CL:1001107
-name: kidney loop of henle thin ascending limb epithelial cell
+name: kidney loop of Henle thin ascending limb epithelial cell
namespace: cell
xref: KUPO:0001050
is_a: CL:1000617 ! kidney inner medulla cell
-is_a: CL:1001016 ! kidney loop of henle ascending limb epithelial cell
+is_a: CL:1001016 ! kidney loop of Henle ascending limb epithelial cell
[Term]
id: CL:1001108
-name: kidney loop of henle medullary thick ascending limb epithelial cell
+name: kidney loop of Henle medullary thick ascending limb epithelial cell
namespace: cell
xref: KUPO:0001051
is_a: CL:1000616 ! kidney outer medulla cell
-is_a: CL:1001106 ! kidney loop of henle thick ascending limb epithelial cell
+is_a: CL:1001106 ! kidney loop of Henle thick ascending limb epithelial cell
[Term]
id: CL:1001109
-name: kidney loop of henle cortical thick ascending limb epithelial cell
+name: kidney loop of Henle cortical thick ascending limb epithelial cell
namespace: cell
xref: KUPO:0001052
-is_a: CL:1001106 ! kidney loop of henle thick ascending limb epithelial cell
+is_a: CL:1001106 ! kidney loop of Henle thick ascending limb epithelial cell
[Term]
id: CL:1001111
-name: kidney loop of henle thin descending limb epithelial cell
+name: kidney loop of Henle thin descending limb epithelial cell
namespace: cell
xref: KUPO:0001054
is_a: CL:1000453 ! epithelial cell of intermediate tubule
is_a: CL:1000616 ! kidney outer medulla cell
-is_a: CL:1001021 ! kidney loop of henle descending limb epithelial cell
+is_a: CL:1001021 ! kidney loop of Henle descending limb epithelial cell
[Term]
id: CL:1001123
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