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NCBITaxon Ontology Subsets


Currently the main subset is taxslim. For construction details, see the Makefile.

The slim is intended to cover:

  • Anything used in a taxon constraint in an ontology
  • All UniProt Reference Proteomes
  • Any taxon that has a non-IEA annotation in GO

OBO NCBITaxon administrators can add to the slim by adding to taxon-subset-ids.txt. This will ensure the taxon plus ancestors are included in the slim the next release.

Note that the taxslim.obo used in this repository is not the release version. The release is produced by Jenkins and consumed by the OBO library build.